G414183


Basic Information

Item Value
gene id G414183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9957989 ~ 9958809 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU475680
GTAATATTGTGAAATACGTAAATACATTGCGGAATTTTATTTATTTAGAATAAAGTTTTCTATTTTAATTAGGGCTGGGAGTTTAACGTGTTAGATTAATTAATTACAGGAAAAAAAATAACGCATTAATTGTTTTGACGCATTTAAATGCACTTGCCCTGCCCCCAGGCCTACACAGGTCATCATCGGACATTTCATACAGTTGACTAATGATGAATATAATGCAGGGCAACAACTCACTGTGTGATATAGCCTATAGAATGCAGTTAGAATGTCCATAAAGATATGAAAGGCGATCGATTTGAACCCTTTGAAGTGCATGACAACACCGGTAAGATCAGAACGTGCTTTGAATTTTGCGCTTTGGCTGTGGTGGCAGCATCCATCAACTGATATGATTTAAACGACACATCACATTCAAATATTAGGCGGCGACTTATGTTTCTGTCGGTTGTTGCCCACAGCCGAACGTCCATAACCGAGCATGCACATGTAATATCTGAGCCAGAGTAGAGCCTTGAGGAGAGTGCGAGTTTTGTGGAGAGATTCGTTGTGCATATTACATTGATTTGCACTCGACATGCGTCGTTAAAAAAATGCCATAGTAACTGCCTCAAGAGAACTATAAAAAAAATGAAAAGAGTGTCGTGTCTGAAAGCTGCAGTCGTTTTTTATTGGTTAAAATGAATGGAGAATATCTCATATTTTTCCATGGGTGCTGAGCGCCTATATAACCTATAGTTCATGATAGGCTATAGTTATCAAGTTTGTGAATATTTTGAATAAAAAGTGAAAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475680 True 801 lncRNA 0.37 2 9957989 9958809

Neighbor

gene id symbol gene type direction distance location
CI01000300_09893990_09906715 NA coding upstream 51251 9891088 ~ 9906738 (+)
CI01000300_09765979_09766870 DCTPP1 coding upstream 190835 9765979 ~ 9767154 (+)
CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding upstream 215952 9724270 ~ 9742037 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding upstream 296278 9658054 ~ 9661711 (+)
CI01000300_09541949_09542458 NA coding upstream 415240 9541490 ~ 9542749 (+)
CI01000300_10056666_10057133 NA coding downstream 97761 10056570 ~ 10057457 (+)
CI01000300_10094312_10098589 NA coding downstream 135123 10093932 ~ 10098669 (+)
CI01000300_10167118_10172235 NA coding downstream 208309 10167118 ~ 10172235 (+)
CI01000300_10357507_10366851 PLRG1 coding downstream 398698 10357507 ~ 10367008 (+)
CI01000300_10387736_10392987 LRAT, LRATA coding downstream 428367 10387176 ~ 10393042 (+)
G414179 NA non-coding upstream 5094 9950629 ~ 9952895 (+)
G414155 NA non-coding upstream 61072 9896633 ~ 9896917 (+)
G414146 NA non-coding upstream 92582 9865192 ~ 9865407 (+)
G414144 NA non-coding upstream 102286 9855410 ~ 9855703 (+)
G414198 NA non-coding downstream 20442 9979251 ~ 9980371 (+)
G414213 NA non-coding downstream 41556 10000365 ~ 10000943 (+)
G414335 NA non-coding downstream 242649 10201458 ~ 10201740 (+)
G414358 NA non-coding downstream 282282 10241091 ~ 10243266 (+)
G414372 NA non-coding downstream 330274 10289083 ~ 10289573 (+)
G413459 NA other upstream 1009386 8857687 ~ 8948603 (+)
G411777 NA other upstream 3488284 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 4065564 5891021 ~ 5892824 (+)
G410388 NA other upstream 5761434 4195646 ~ 4196555 (+)
G410382 NA other upstream 5833573 4123698 ~ 4124416 (+)
G414249 NA other downstream 411102 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 641127 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 687382 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 1744675 11704476 ~ 11708351 (+)

Expression


Co-expression Network