G414274


Basic Information

Item Value
gene id G414274
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10408783 ~ 10409068 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU475801
GTATCGCTCTTATCTTGCCATGTTTATGATCAAATGTATATTTTCTAATTTAAAGACATCTTGATGAAAATGTAATGTAGTATTTGTTTCAATTATTCCTGAAATAATTATATCAAATGTCAAAAAAAAAAAAAGGAAAAAAAAGGGGGTTAAAAACAAAATTAAATAAAGCTCATTTTCCAAATGGGATGGTTTTATTAGGTGGGCTCCAGGGTGGAGGGGGCTCATCCTGAAGAATAGCCTGTATCCTCTTTTCATTTCTGTCTCTTTTTTGTTGAAACTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475801 True 286 lncRNA 0.31 1 10408783 10409068

Neighbor

gene id symbol gene type direction distance location
CI01000300_10401994_10404248 NPY2R coding upstream 4108 10401565 ~ 10404675 (+)
CI01000300_10387736_10392987 LRAT, LRATA coding upstream 15741 10387176 ~ 10393042 (+)
CI01000300_10357507_10366851 PLRG1 coding upstream 41775 10357507 ~ 10367008 (+)
CI01000300_10167118_10172235 NA coding upstream 236548 10167118 ~ 10172235 (+)
CI01000300_10094312_10098589 NA coding upstream 310114 10093932 ~ 10098669 (+)
CI01000300_10445111_10492819 GUCY1A3, GUCY1B3 coding downstream 36043 10445111 ~ 10493542 (+)
CI01000300_10496235_10498777 FABP2 coding downstream 87106 10496174 ~ 10498944 (+)
CI01000300_10604458_10604787 NA coding downstream 195390 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 coding downstream 252612 10661680 ~ 10674265 (+)
CI01000300_10675299_10675754 NDUFB6 coding downstream 265521 10674589 ~ 10676912 (+)
G414420 NA non-coding upstream 239 10408193 ~ 10408544 (+)
G414266 NA non-coding upstream 1091 10407292 ~ 10407692 (+)
G414419 NA non-coding upstream 2167 10406296 ~ 10406616 (+)
G414411 NA non-coding upstream 24894 10383616 ~ 10383889 (+)
G414409 NA non-coding upstream 26791 10381761 ~ 10381992 (+)
G414270 NA non-coding downstream 1857 10410925 ~ 10411671 (+)
G414425 NA non-coding downstream 6971 10416039 ~ 10416408 (+)
G414423 NA non-coding downstream 9491 10418559 ~ 10419139 (+)
G414424 NA non-coding downstream 10485 10419553 ~ 10419780 (+)
G414432 NA non-coding downstream 19747 10428815 ~ 10429144 (+)
G414249 NA other upstream 34885 10369911 ~ 10373898 (+)
G413459 NA other upstream 1460180 8857687 ~ 8948603 (+)
G411777 NA other upstream 3939078 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 4516358 5891021 ~ 5892824 (+)
G410388 NA other upstream 6212228 4195646 ~ 4196555 (+)
CI01000300_11704476_11708232 NA other downstream 1294416 11704476 ~ 11708351 (+)

Expression


Co-expression Network