G414270


Basic Information

Item Value
gene id G414270
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10410925 ~ 10411671 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU475797
TGCTGTTTCCTTTTTTTCTTGTTTTTTATCCATTTCCATTTGTTGTTGGTTGATTGCTTCCTGATTTTCTTTGACTTTCTTTCTGATGATTTCAGCTTTTTTCTCTTTCCAGGCATCATAAGAGGCCTTTGCATCTGCAATTTTAGCAAGCTTTTCCTCGAAGGGAAATGACAATAAATAAATCACAACAGGACTATGTTGACTAAAGAATTCAATTAATTTATTGCAGAAGAAATGTGTATTAAATCTTTGCGGTGCATCCGAAGTCGCATACTGTCTGACTAGGTACTACGTTTGAATTTAAACTTACTTCGAAATGGTTAAAAAAAGTACGCTCTATATAGTACGAATATGGGTAGTATGAATGAAATTCAGACGTACAAAATCCGCCATGTTGTTACGGTCACGTGACCTACCAGCGTCAGCTGCGTCGCTTCACTGACTTTCATAAATCCTCTTCTGTGGCCTTGTGGGATAGTAAAGTGTCTATCGAATGCACACTTCAGAATCTCGGCAGAAGTAATAGGTCATCCGGGTAATTTTTTGTTGAATACTATGAATTTGGACATACTACTTTTTTGGCGTACAGTTTTTCACATATATAGTAGGGAAGTAGTCGATTTCGGATGCAGCGTTGGTTTATGTTAATTACCTCTTGCATTTTCTCCTCTTTCAATTTCTCTTCCTGCTTTTTTGCTTTTCTTGCTATTTTTAAAGTTTCTTCTTTCTTTTTTAGCCATTCCTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475797 True 747 lncRNA 0.36 1 10410925 10411671

Neighbor

gene id symbol gene type direction distance location
CI01000300_10401994_10404248 NPY2R coding upstream 6250 10401565 ~ 10404675 (+)
CI01000300_10387736_10392987 LRAT, LRATA coding upstream 17883 10387176 ~ 10393042 (+)
CI01000300_10357507_10366851 PLRG1 coding upstream 43917 10357507 ~ 10367008 (+)
CI01000300_10167118_10172235 NA coding upstream 238690 10167118 ~ 10172235 (+)
CI01000300_10094312_10098589 NA coding upstream 312256 10093932 ~ 10098669 (+)
CI01000300_10445111_10492819 GUCY1A3, GUCY1B3 coding downstream 33440 10445111 ~ 10493542 (+)
CI01000300_10496235_10498777 FABP2 coding downstream 84503 10496174 ~ 10498944 (+)
CI01000300_10604458_10604787 NA coding downstream 192787 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 coding downstream 250009 10661680 ~ 10674265 (+)
CI01000300_10675299_10675754 NDUFB6 coding downstream 262918 10674589 ~ 10676912 (+)
G414274 NA non-coding upstream 1857 10408783 ~ 10409068 (+)
G414420 NA non-coding upstream 2381 10408193 ~ 10408544 (+)
G414266 NA non-coding upstream 3233 10407292 ~ 10407692 (+)
G414419 NA non-coding upstream 4309 10406296 ~ 10406616 (+)
G414411 NA non-coding upstream 27036 10383616 ~ 10383889 (+)
G414425 NA non-coding downstream 4368 10416039 ~ 10416408 (+)
G414423 NA non-coding downstream 6888 10418559 ~ 10419139 (+)
G414424 NA non-coding downstream 7882 10419553 ~ 10419780 (+)
G414432 NA non-coding downstream 17144 10428815 ~ 10429144 (+)
G414444 NA non-coding downstream 143617 10555288 ~ 10556419 (+)
G414249 NA other upstream 37027 10369911 ~ 10373898 (+)
G413459 NA other upstream 1462322 8857687 ~ 8948603 (+)
G411777 NA other upstream 3941220 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 4518500 5891021 ~ 5892824 (+)
G410388 NA other upstream 6214370 4195646 ~ 4196555 (+)
CI01000300_11704476_11708232 NA other downstream 1291813 11704476 ~ 11708351 (+)

Expression


Co-expression Network