G414872


Basic Information

Item Value
gene id G414872
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10777866 ~ 10778104 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU476498
TTTTTTTTGTCCATGAGGAAAACAGTTTATACAGTTTTTTTATTTTATTTTATTCGCTTTGGTACTATTTTCACAAGTAAGGTGTACATTTTCAAAACTCAGTACTAATATCACAACAGATCATCAAAAGTGCACTTTTTTCAAACATTTCAGCATATTTTCAATTGTTTTAGTACAGTACACAAAAATCACAAAGTATCCTTTTCACAACACAAAATAAGTGTTTCATCTATATAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476498 True 239 lncRNA 0.26 1 10777866 10778104

Neighbor

gene id symbol gene type direction distance location
CI01000300_10764813_10766212 NA coding upstream 11617 10764133 ~ 10766249 (+)
CI01000300_10688627_10696530 MTAP.L, MTAP coding upstream 81336 10688627 ~ 10696530 (+)
CI01000300_10682604_10685243 TOPORSA, TOPORS coding upstream 92592 10681317 ~ 10685274 (+)
CI01000300_10675299_10675754 NDUFB6 coding upstream 100954 10674589 ~ 10676912 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 coding upstream 106460 10661680 ~ 10674265 (+)
CI01000300_10854388_10857566 NA coding downstream 76284 10854388 ~ 10857574 (+)
CI01000300_10896258_10905139 NA coding downstream 118154 10896258 ~ 10905260 (+)
CI01000300_10938720_10949086 ARHGEF38 coding downstream 159610 10937714 ~ 10949231 (+)
CI01000300_10955227_10962261 G3BP2 coding downstream 177123 10955227 ~ 10963136 (+)
CI01000300_10969048_10992283 USO1 coding downstream 190944 10969048 ~ 10993226 (+)
G414862 NA non-coding upstream 15865 10761742 ~ 10762001 (+)
G414860 NA non-coding upstream 17994 10759592 ~ 10759872 (+)
G414840 NA non-coding upstream 36828 10740737 ~ 10741038 (+)
G414496 NA non-coding upstream 39146 10733616 ~ 10738720 (+)
G414495 NA non-coding upstream 50425 10727240 ~ 10727441 (+)
G414880 NA non-coding downstream 18874 10796978 ~ 10797194 (+)
G414881 NA non-coding downstream 20601 10798705 ~ 10798925 (+)
G414883 NA non-coding downstream 21612 10799716 ~ 10799950 (+)
G414885 NA non-coding downstream 25797 10803901 ~ 10804156 (+)
G414930 NA non-coding downstream 82835 10860939 ~ 10861213 (+)
CI01000300_10604458_10604787 NA other upstream 173104 10604458 ~ 10605033 (+)
G414249 NA other upstream 403968 10369911 ~ 10373898 (+)
G413459 NA other upstream 1829263 8857687 ~ 8948603 (+)
G411777 NA other upstream 4308161 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 925380 11704476 ~ 11708351 (+)

Expression


Co-expression Network