G415078


Basic Information

Item Value
gene id G415078
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11290408 ~ 11290643 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU476749
GGATAATGAGGGGATTGATAAGAGGGCTCTCTTCCTGTGGGCGATGGGGGGGAGAAAGGGGAGCCAGCGGGGTGGAGGGAGCAATGCTTGCCCCATGTGTCTCTGTTGAATTGTGGGAAAAAGGAGCGAAGTGATTCCCCTACAGGCTGTATCAGATTTCCCCTGAGAGGATCATGCTGCTCAAATAATGTGAGCCCCTGGCAAACACAGAGAACCTTTTCACTCCTTTGTTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476749 True 236 lncRNA 0.52 1 11290408 11290643

Neighbor

gene id symbol gene type direction distance location
CI01000300_11141716_11143148 NA coding upstream 146813 11140851 ~ 11143595 (+)
CI01000300_11044621_11061213 NA coding upstream 229143 11044568 ~ 11061265 (+)
CI01000300_11036591_11037929 HEMGN coding upstream 252301 11034674 ~ 11038107 (+)
CI01000300_11005365_11024863 CORO2A coding upstream 264189 11005365 ~ 11026219 (+)
CI01000300_10969048_10992283 USO1 coding upstream 297182 10969048 ~ 10993226 (+)
CI01000300_11303493_11313969 NA coding downstream 12706 11303349 ~ 11314080 (+)
CI01000300_11323703_11358998 NA coding downstream 31810 11322453 ~ 11359248 (+)
CI01000300_11370829_11375624 NA coding downstream 80186 11370829 ~ 11375773 (+)
CI01000300_11444117_11455995 BNC2 coding downstream 153474 11444117 ~ 11456338 (+)
CI01000300_11478840_11479838 NA coding downstream 188140 11478783 ~ 11480053 (+)
G415028 NA non-coding upstream 3391 11200215 ~ 11287017 (+)
G414909 NA non-coding upstream 141281 11079100 ~ 11149127 (+)
G414949 NA non-coding upstream 211886 11077919 ~ 11078522 (+)
G414948 NA non-coding upstream 214864 11075337 ~ 11075544 (+)
G414946 NA non-coding upstream 216542 11073637 ~ 11073866 (+)
G415080 NA non-coding downstream 179168 11469811 ~ 11473607 (+)
G415103 NA non-coding downstream 250311 11540954 ~ 11541281 (+)
G415108 NA non-coding downstream 261619 11552262 ~ 11552599 (+)
G415161 NA non-coding downstream 364420 11655063 ~ 11714698 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other upstream 626921 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA other upstream 685646 10604458 ~ 10605033 (+)
G414249 NA other upstream 916510 10369911 ~ 10373898 (+)
G413459 NA other upstream 2341805 8857687 ~ 8948603 (+)
G411777 NA other upstream 4820703 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 412841 11704476 ~ 11708351 (+)

Expression


Co-expression Network