CI01000301_00759695_00763509


Basic Information

Item Value
gene id CI01000301_00759695_00763509
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 759139 ~ 763908 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000301_00759695_00763509.mRNA
AGAGCTTGCCACACGGATTAACCTGGATTGCCTTTTTTGACGCAATAACTAAATAGTAAGTAGAAAAGTTTTCAGTTCTCTGTATGCATGTGATATAAAATGTATTTAAAAATACAAACATTAATATGTAAGTGTGTGCTTTTTTTTGTAAATCTTAATACACCCTTGAAAGGGGTGTGTAGAAGATATTATGTTTTATTAAATAAAAAAAAATACTTTGTAAATATAACTGCAGTCGTTTGTTGCTTATATCCAGCTCTTGATACTTTTTGAAATTGTGACATCAAGATCACCAGCCCTGTGGATGTTTTCTATCTATTTTATGCTGCATGAAGAAATGTTTTCTATATCATACTTGTATGCTTCACTTTTTAGGCATATTGCTAAAAGAAGATCACAATGGAGTGGAGGATTATTGTACCCGTTCTGTGTCTAATTGGAATCCTACATGTGCCTGGAAATGCTGCTCAAGATAACACCACTGTTTATCGATTCACTCTGAGCTTCAGCATCAATGCCACTTTCCCGAGTGACTACTCCAACTTCACCAGTAATAACACCAATGACCTGAAAAACAACATCACCAGTCAGGTTGAGCCACCTTACAAGAAACAGTATACAAACTTTCAACGCTTCAATATTTCAAGTTTTAACTTCAGTAATGGCTCCATTGTGACAGTGGGAGAACTTCAATTTTCCAACGGCTCTAAGCCTAATATATCAGATCTGACACAAGTCTTGAATAATGGAAGTTTCACCTTCATAATCATTACGAATTCCACAAATGCTGTTGAAGTCACACAACCTGCTGCAACAACACCTGCAACAACTGTAACAACTCCAACTACAACGGCCCCTGCACCTGCTAAAGTTGGAAAGATTAGTTTGGTGTTCAAGCTTCTTCAAACCTTCAAGGACATCTACTCCAATTTCAGTAATCCTGAGACCATAGAGCTGACAAATAACATCACCACTGCGTGTTCTGGAGTTTACAAGGCTCGTTTCTCACAGTTCTACCGCATGGTTATTCAGAAGTTCAGCAATGGCTCCATTGTGACTGATTCTACCCTCGAGTTTAACACCACGAATAGCGCTACTCCTACTGCGGCAGAAGTGAAAGACACCCTTACTGCGGCAATCGCAAATGGAAATTTCAGCTTCAAAATTGACAACACATCCATCAGTGCTGTTGTTATCCCAGAAATCGATTCTTCTCTTAAAGAGTATAGTTTAACCTTCAAAATGAATCAAACTTTCACAAGTGACCTTTCAAATATGTCATCTGATGGAGCCACAAAGCTGGCAAAAAACATCACTACTGAGCGCTGGCTACTTCTCTTGCTGCGGCCGTTAGAAATGGAACAGTCAAATTACCAATTGATCCAAAAACCATCAAAGTTACAGATACAGTTACAGGAGCCAATGCTAACAGGTCTCCAGTCCTGGCTAGTATGCTCACAGCTGTGTGGATGACCCTAGCATCACTTCTGTTGTCAGTTGTGATGCACTAATCACAAAAACATGCGACTACAAAACAATTGTGAAATCTCTGATATTTTCGTTCTCATTCAAAATCAGCAAATCACAAAGCAAAACAAGTCAAGTTATGATCTAGCTGTAACATTTACTAGTCTTTCTTGCCACATATAGAGCCTGGTGATACATAAGGTATGCGTGAGTTACATTATTTTGGTCTGTGCTTTGCAAAAAGCACATTGTTCCTCTGTACACTGAGCTGGAGAAATAATGAGGATCAGTTCATTGAAACCAAATCTGAACATTTCTCTATGCCACAGAAATGGCACAACTGCCAATGTATTAGTTAGATGCTGAAGATCTATTTTTTTGTAATACACATGTGCAATCTATGCATTTAATCATTGAGTAATAGAAATGAAAAAATGTTCTGATAAATCTGAATATTCCTCTAAGCCATACAAATGGCACAAGTATAATTTATATTTAAAGGTATTATAATGTGATTCAGAACTGATATTGTTTTGCTTTTTGCTTTTTTTTTTTCAATAAA

Function

NR:

description
hypothetical protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000301_00759695_00763509.mRNA True 2029 mRNA 0.37 10 759139 763908

Neighbor

gene id symbol gene type direction distance location
CI01000301_00723145_00732453 CALY coding downstream 26686 722191 ~ 732453 (-)
CI01000301_00687025_00688716 MSX1B coding downstream 69911 686544 ~ 689228 (-)
CI01000301_00643063_00650841 TAF5 coding downstream 107518 642480 ~ 651621 (-)
CI01000301_00614925_00640312 PDCD11 coding downstream 118827 614654 ~ 640312 (-)
CI01000301_00598019_00599989 NA coding downstream 159150 597987 ~ 599989 (-)
CI01000301_00851555_00904753 FAM13A coding upstream 87497 851405 ~ 904753 (-)
CI01000301_00910345_00934727 NA coding upstream 146234 910142 ~ 934794 (-)
CI01000301_00942218_00944206 NA coding upstream 177740 941648 ~ 944418 (-)
CI01000301_00981124_00984214 NA coding upstream 216914 980822 ~ 984612 (-)
CI01000301_00985983_00986183 NA coding upstream 221789 985697 ~ 986637 (-)
G416378 NA non-coding downstream 168579 582833 ~ 590560 (-)
G416374 NA non-coding downstream 185925 533995 ~ 573214 (-)
G416390 NA non-coding downstream 226711 521254 ~ 532428 (-)
G416423 NA non-coding downstream 238265 520389 ~ 520874 (-)
G416337 NA non-coding downstream 346869 399897 ~ 412270 (-)
G416373 NA non-coding upstream 32251 796159 ~ 819078 (-)
G416376 NA non-coding upstream 36231 800139 ~ 817745 (-)
G416511 NA non-coding upstream 147827 911735 ~ 912460 (-)
G416571 NA non-coding upstream 227128 991036 ~ 991309 (-)
G416375 NA other upstream 55840 819748 ~ 831202 (-)
G416547 NA other upstream 289210 1053118 ~ 1054771 (-)
CI01000301_01082494_01085192 NA other upstream 318069 1081712 ~ 1085573 (-)
CI01000301_01756221_01772903 NA other upstream 1008412 1755937 ~ 1772971 (-)

Expression


Co-expression Network