CI01000301_00910345_00934727


Basic Information

Item Value
gene id CI01000301_00910345_00934727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 910142 ~ 934794 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000301_00910345_00934727.mRNA
AGTCAGCTTCGGCTGAAGATCATCACACTGTTTCTCGATTGGATGACGCTGAGGAACATCAGAACAAATGAAGTCCAAGAAAGGTCTGACAACCCTAGAGAAGAGCCTGATTTTCTTATTTGTAGCCCTGACTGCAGTCAGTATTGGACTAGTTGTGGTGTTTGTCATTGAGAAGAACAACTCAAGTCCAAGAGAGGATGAGATCGATACGGGATGTGGTAGTCTGCAGGAGCTGACGGCTTCCTCAGGGGAATTTTCCAGTGGGAATTACCCCAGCAGCTACGACAATGGCATGAGCTGCAGTTGGCACATCACAGTAGAAGCCAATAAGGTACCGGGTGACACTTACCTCAGCTCATTAGCCGTTAGCTGCTCATTAGGACACTACTTCTCTATAGAGGACTCCAATACGTGTGAGGCCGACTTCGTCACTCTCAAGGATGAACTCGGCACCATTGGGAGGTACTGTGGTTATTCAACGCCTAAACCAATAGTGTCCTTAGGAAACAGCATTTTTGTGTACTTTGACACCAACGACAGATACACAGAGAAGGGATTCAAAGCCCTGTACCAAGCTGTGGCCCCTGAGACGGCGTCAGAAATAGTTGGGGCTGGTGGCGTTCTTCAAGGTGACCGTGGGGAGCTGTTGACCCCTGGATTTCCTGCACAAAACTATGAGAATGGCGTGCTCTACCAGTGGATGATACGCGTACCTGATTGGGAAAAGGTCCGGCTAACATTCACAGCTTTTGACCTTGTCCCAGAATCATGTGGTGACTTTGTGGACGTCTATGATGGTGCTTCAGATGGTGCCGCTCAACTGGGTCGTTTCTGTGGAAACAAGGTCCCGGCTCCGGTGTTGTCTAGTGGCAGTAGTATGGTGGTTCGTTTCAAGTCTGATTCGAGCGGGACTGCTAAAGGCTTCAGCGCCACCTACACCATAGCAAGTGCCCCACCAATTACAACCACACCAACAACCACCACCAAGACCACGACCACTGGACCAACAACCACCACACCAGTTCAGACACCCACACCTGCTCCAGAAGACTCTGGCTGTGGGTCTCCTGGGAAGCTGTTCGGACGTAAAGGTCAGATAAGCTCCAAGAACTATCCTCAGGCTTATCCTGCAAACTTGAGCTGCTCTTGGGACATCACAGTGGATGAGGGCTTTCTTGTCAAACTGCACATCACTGATCTGGCCATCGTGGGTGAAGCAGGCCAATGCGGCACAGATAAACTCACCGTCATCGATAGTCAGCAGTCACTGGGCACACACTGCGGGTTTGTTCTTCCCCCAGTTCTTATCAGTGTCAGTAACAACATGTTGCTAAGTTTCCAGTCAGATGCTCGGCTAGCCGACCGTGGCTTCTCTGCCACATGGGAAGCTGTGTATCCAGAGGACCTTTCTGATATCCAGGGATGTGGAGGTTTCTCACAGGAGGAGACAGGCATCATCAAGTCTCAAAACTGGCCCATGAACTATCCGGCTAACAGCATGTGTCTGTGGACCATACGCGATCCCAAGGGGAAGACCATTAAATTGACGTTCACTGACTTTGACGTGGAAGAGGCTGGCATCCTTTTCGGCCAGTGCAATGACAACGTGGTTGTCTACGACGGAACACAACCTGGAGCAAAAAAATACGGCCCCTTCTGTGGCTCCAAAATGCCTGCTGTCATCGAAAGCACAACAAATGAACTTGTGATACGTTTCTATGCCGACTATTTCATTGAGGGCAAAGGTTTCCGTGCACACTGGACTACCGATTCTACCTTACCTACCCCCACCGAACCTCCGGTGCCACCCAACCCATGGGATGACATTACGATAGACTGGCCTGAGAGCTGTGGGAAGCCCACGATCCCTCCCGCTGTCAACACTCGCATAGTCAACGGAGAACCTGCCAATGCTCACTCCTGGCCATGGCAAGTATCCATGCAGGTTTGGCGTGACTCAGAGCCTTCACCCAAGTTCGGTCATACATGTGGTGGAACTCTCATCCATAAGAATTGGGTCCTGACAGCTGCTCACTGCTTCATCAGGTATGCCGATGAGCTGCAGCGCTGGAAAATGTGTTTAGGGAAACACAACCTGACCTTCTCTGAGCCAACTGAGCAGTGCTTTAACGTGCTTGGCATCTATCGCCACGAGGGCTTCCAGTACCCAACTGTGCCAACCGTGGAGTTTGATATCGCCCTGGTGCGACTGGATGGAGAGGTCACACCCACCGACCATGTTGATTTCGCCTGTCTGCCTTCAGCTGAGGAGGTCCTGCCCGAGGGCAAAAAATGCTACGCCACAGGCTGGGGAGATGAAACAGGTAACTCCACTGCTCCTAAAGTTGCTGAGGCATTGAACCAGGTGGCCCTGCCGGTAGTGCCGTACGACACCTGTAAACGCATGGACTACTGGTGGTTCCAGGTCAAGACCTCCATGATCTGCTGCGGCTACACTTTACCTGATGAGCTCAAGTCTGTCTGCCAGGGTGACTCGGGTGGACCCCTGGTATGCCAAGACAGCTCCTCGGCCCCTTGGGAGGTGCATGGCATCACTAGTTTTGGTCCAATCGGCTGTGTCTTTGATAAGAAGCCCAGCGTCTTCACTCGTTCCTCCGCCTACCTGCCCTGGATTGAGAACATCATTCGCAAAGACATATATGACCTCATCGGTTCTGGTTGTGGTGGCCTGAAGGATCTGGTTGGCACGGAGGGCATGCTGGCATCAATGGATCATCCATATAGTTACAGTAACAGAGCTTCCTGCCAATGGAATATCCGTGTGCCCACAGGACAAAATGTCTACCTTCACTTTAGCAACTTCTCCCTGGAGGATACCACACTGTGCCTCAATGACAAAGTCACTCTCAGTGATAACATTGGCACTCTAGGTACCCACTGCAGCACATCTCCTCCGAGAGATCTAGTCACGGCTGGTGACACACTGACTATCAGTTTCTCCTCCAATGACAAAATTGTGGACGCAGGGTTCAGTGCCGAATGGAAAGCAGTGGATCCTGCTGACATAGAGACTGCTGTTGGTTGCGGTGGGCACTTCACAAGTCAAAAAGGGGAGCTCCAATCACCCAACTGGCCCAATGAGTACCCAAGCCAAGCGGTGTGCACCTGGACTATCGACATCCCCTCAGCCACTGGAATCCATATTGTCTTCACTCACTTTGAACTGCAGGCTGTTAGTTTGCTGGGGCAGTGTGTGGATTATGTGGAGGTCTTTGATGCTGCTGGGTCATCACAAGGCAAATTTTGCGGCTCTATCCCACCATCTTTAACTGTCAATGGGGACAAGGCCACCATCCGCTTCCTCAGTAACAATGCTAACCAGAAAAAGGATGTTGGTTACGTAACAGGCTGGGGGAATGAGAGAGGTCAGAGGAACAAAGACCTGTTCATCTGAGTTGATTGATTTAGTTGAGCATCTGTTGTCATTTGTTCTAGTTGCTATTCAGTGATTAGTGAGCATCAGAGGATATTAATTATGCATTTATTGTGAAGTGATTACGATGCAAATGTAGGGTCAAAATGTGCCCTTTGACCTTGAAGATAACCCTTCTGAAATGTTAAGCAGTACATGGACTTGTAAATTATAATAGGTATAAA

Function

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01346 CELA2; pancreatic elastase II

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000301_00910345_00934727.mRNA True 3618 mRNA 0.50 21 910142 934794

Neighbor

gene id symbol gene type direction distance location
CI01000301_00851555_00904753 FAM13A coding downstream 5389 851405 ~ 904753 (-)
CI01000301_00759695_00763509 NA coding downstream 146234 759139 ~ 763908 (-)
CI01000301_00723145_00732453 CALY coding downstream 177689 722191 ~ 732453 (-)
CI01000301_00687025_00688716 MSX1B coding downstream 220914 686544 ~ 689228 (-)
CI01000301_00643063_00650841 TAF5 coding downstream 258521 642480 ~ 651621 (-)
CI01000301_00942218_00944206 NA coding upstream 6854 941648 ~ 944418 (-)
CI01000301_00981124_00984214 NA coding upstream 46028 980822 ~ 984612 (-)
CI01000301_00985983_00986183 NA coding upstream 50903 985697 ~ 986637 (-)
CI01000301_01040203_01048045 SPAST coding upstream 105332 1040126 ~ 1048045 (-)
CI01000301_01061298_01069683 PSEN2 coding upstream 126051 1060845 ~ 1069683 (-)
G416373 NA non-coding downstream 91064 796159 ~ 819078 (-)
G416376 NA non-coding downstream 92397 800139 ~ 817745 (-)
G416378 NA non-coding downstream 319582 582833 ~ 590560 (-)
G416374 NA non-coding downstream 336928 533995 ~ 573214 (-)
G416571 NA non-coding upstream 56242 991036 ~ 991309 (-)
G416575 NA non-coding upstream 78396 1013190 ~ 1014387 (-)
G416539 NA non-coding upstream 84570 1019364 ~ 1022667 (-)
G416538 NA non-coding upstream 100508 1035302 ~ 1038330 (-)
G416550 NA non-coding upstream 120542 1055336 ~ 1058838 (-)
G416375 NA other downstream 78940 819748 ~ 831202 (-)
G416547 NA other upstream 118324 1053118 ~ 1054771 (-)
CI01000301_01082494_01085192 NA other upstream 147183 1081712 ~ 1085573 (-)
CI01000301_01756221_01772903 NA other upstream 837526 1755937 ~ 1772971 (-)

Expression


Co-expression Network