CI01000301_00942218_00944206


Basic Information

Item Value
gene id CI01000301_00942218_00944206
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 941648 ~ 944418 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000301_00942218_00944206.mRNA
ATTCCCTTATAACTGTATATATTTTGCAGATAAATGTTCAGGCAGATTCTAACACAGTTCATTTATAATGATCGCAAGAAGACAGTGTATCTAAAATTATTTTTATCTCTCTGCTCTAGGGAAGTCTTGAAGGGGACAATATCAGGCTTTCAGAGGGGAACCAAATTGGAATATTCTGACTTTGGATTTTCATTACATAAAAGGGATTCAACATGGAAAATGTACCAAACCCCAAAAGGACTGTCACTGTCCAGATGATGCCTCAGCTCACCAGTATAGATGTGCTGGGAAATAAAGAGTTAAATGCTAACTGGGACATTGAGCCAAAGTTAACCTTAAATCAGGATTGCTCAGATCAGGATAATATGCATCTCAATTCCTCCATCAAAGATTCCCACACCACTCTTCTTGGAGGGACTGTCCTTGAAGACAAACACGTGTCGTCCCATGGCAGCGAAGAACACAGGCAACCTCAAAATAGTCACGTAAACATAAAGACCTCAGGTCAGTGTGCCAAGAGCACTGAAGGTAGAAAAACTGATTGCGATATGAATTCAAATTCAAAAACTGTCCTTTCGACATCCAGCCCATCATCTACAACTACATATAACGCTGACCAGGAGAGAAATGGCAATAGCACAACAAAGGCACTTCAAAATGAACAACATGAGCCCAAAGTACAGAGCAAAGCATCAGTAGTTCAAGAAACTAGTGCGATCAAAGTGACTCTGCACAATCAAACGCCAAGCCAGGCTCGGGCTCCCAGCACCAACAACACAATCAAGGACATGTCACTTTTATCTGAATCAAAAGATGTGAGTTGCACCACCAGCATAAGCATCAGCAGTTCCCCGCTTGAACGGGTATCCACTACCAATGCTCCTAAAACCAATCACTCAGTGACCAAAACATCTGGACCAGCACCTGGGACAAGAATTCAGACCCCGCAACCACACGAGATCCATCATATGCCGGTTAAAGAGGACAAATGTAGCAATGACGGCGTGAAGGATTTTAAACCACCAGGAACTGCTCAAGAGACTTCTTCTGGACGCCCATCTTCAGCTAACAGTGCAAGTCACTCGGTCCACACGGAAGTGATTGATGAGGAGGTCCAAACACAGGGAGCTGCTCCTGAAGAGCAGAAGCAGGTCCACTGTAAACTCTATCGTGAGGCATCTACCATGACTTCAGCAGCTGAGTTTGGCGACCAACCCGGCACGCAACGGCATGACGTGGAGGTGCAGGCGGTTGCTACAGTCTGCAGTCAATCTACAGCCACTAGCCCTAGTCTTCTGTCTCTACAACCCCATCGGAGATCAGTTGGCCTACTACCTGAGGAGAATGACAGTATAGCAGTGGTCGTTGGGGTGAAGACCACCTCAGAGGTCCCATCTGTTGTTGCATCCAGTACGATCCTCCCTGGGAAGCCTCCAAAGTCAGACACAGTGATGGTGCATGTAGATGCTGACCTTCAGGAAAAGTCCAAGCTTGGGCCCAAGCCTAAAGAGCCTCAACACAACAGCCAAAGAGGATTTTCGCCGCTTCAACCGGTTTATCAGATCAATATCGAGACCTGCAGCCAAAGCAAACAGTCAAACGAGACTACCTGTCACCTTCAGAGCCAGGGTTCACCTGCGGTCTCAGCATCTGGTCCTCATAAAGTGGCATGTGTGCAGGAGCCCAAGACAACATCTGCTCAGATCTGCCAGGATCTGCCAGAAAAATCGGCCAAGCCTCCTGCATTGAAATCCAAGGAGGCAAGTTCTGCAAAACCTCCAAAGGACATCACAATGACCACTCCTCCAACATCAAGCTCGACACCACAAAGTAAAAAGACAGAGCGCCAACAGAAGGGAGCGTCAAAGCAGGAGCATGAGAAAGAAGACCAAGAGGAGGAGAGTACCAAGCAATCCAAGAACAGTGTGCATGACGTTGTGTGGGACGAGCAAGGGATGACATGGGAGGTATACGGAGCGTCTGTGGATCCAGAGTCGCTGGGATTTGCTATTCAAAGTCACCTGCAGTGCAAAATCAAGGAGCATGAGAAGAAGATCATCACCCAGGCGACTATCAGAAAATCCTTGTCTTCGCCTCCTGGCAAGAAGAACAAGAGGAGGCAGGTTAACATCAACTTCAGGTCCATGTTCCAAAATGTCCGCCGACCCAACTGTTGCGCACGTCCGTCTGTACTAGAATGAAAGATGATTGGTTTTCATTGAGAGGACAATGTGATCTTCCATGAGACTGTGCAAAGCATGTTGGAAGATGTCTCTCGTTTGTTTTTTGAAGAGTTTGTTAAACATAGAAATGGTGATTTGAGTGTTATGTGGAGAACAGTAATGTTAAAAGAAAATATTTTTAGAAAAAGATGAAATTATTTATGGTGATAGTAAAGCTATAACAATGTTTAGAGTGCAATGGCAATAATTATAATTAATATAATAATAACAGTAATGATAATATGTAGCAATCTGCATGTGTATTAGTTCAGAATGGCAGTCTTCTAAATACCCAAGATTATGCACTGTACTGACGAGCAGATGTATGCATATAACCCTTTTTACCGACTTTGTTTAGTTGAATATCTTTTTAAACTTTAGTAGGTTTGTTTGGTAAATATTTGTTTTGCATAATTTTGTTTGTAACACTGTTGATTTATTGTGAATATATTTTATTTTATTTAGAAAAAAACAAAACAAAAGAGCTTCACAATGCTTATTATTATCATATTTGGTGTAAACTGAGCCTGTTTATGATTTTATATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000301_00942218_00944206.mRNA True 2771 mRNA 0.43 1 941648 944418

Neighbor

gene id symbol gene type direction distance location
CI01000301_00910345_00934727 NA coding downstream 6854 910142 ~ 934794 (-)
CI01000301_00851555_00904753 FAM13A coding downstream 36895 851405 ~ 904753 (-)
CI01000301_00759695_00763509 NA coding downstream 177740 759139 ~ 763908 (-)
CI01000301_00723145_00732453 CALY coding downstream 209195 722191 ~ 732453 (-)
CI01000301_00687025_00688716 MSX1B coding downstream 252420 686544 ~ 689228 (-)
CI01000301_00981124_00984214 NA coding upstream 36404 980822 ~ 984612 (-)
CI01000301_00985983_00986183 NA coding upstream 41279 985697 ~ 986637 (-)
CI01000301_01040203_01048045 SPAST coding upstream 95708 1040126 ~ 1048045 (-)
CI01000301_01061298_01069683 PSEN2 coding upstream 116427 1060845 ~ 1069683 (-)
CI01000301_01082494_01085192 NA coding upstream 137508 1081712 ~ 1085573 (-)
G416511 NA non-coding downstream 29188 911735 ~ 912460 (-)
G416373 NA non-coding downstream 122570 796159 ~ 819078 (-)
G416376 NA non-coding downstream 123903 800139 ~ 817745 (-)
G416378 NA non-coding downstream 351088 582833 ~ 590560 (-)
G416571 NA non-coding upstream 46618 991036 ~ 991309 (-)
G416575 NA non-coding upstream 68772 1013190 ~ 1014387 (-)
G416539 NA non-coding upstream 74946 1019364 ~ 1022667 (-)
G416538 NA non-coding upstream 90884 1035302 ~ 1038330 (-)
G416550 NA non-coding upstream 110918 1055336 ~ 1058838 (-)
G416375 NA other downstream 110446 819748 ~ 831202 (-)
G416547 NA other upstream 108700 1053118 ~ 1054771 (-)
CI01000301_01756221_01772903 NA other upstream 827902 1755937 ~ 1772971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location