CI01000301_00981124_00984214


Basic Information

Item Value
gene id CI01000301_00981124_00984214
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 980822 ~ 984612 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000301_00981124_00984214.mRNA
ACAGTTAGCTAGCCTATATTACCAAATAAGAATTAATGCTTCATATCTGACATTAGCTACTACTGTCGCACCCACAACAGAGATATGAGAGACAACATAATCCCAGAAAAAACAACACGTACTTCTAAAACAATTTTGCGTCCACCAAAAGCTGTTAAAGAGGATCGATCCCGTAAAATCAAGATATCTGCTGGCACTAACCTATTGTCCAGGGGTATTTGTGTAATCCCAAAATGCAGTAGAGTTTCCTGAGCAGTATAAACCCGTAAAGCCGCGGGATCAGCCGGCCTGAAGCAAGTGAGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGAGTGAGTGGTCTCTTTGCTAGGCGGATTGTCGTGTCTCTTGTAAATTGTCGGCGCTTATTAAAACGATGGCGCATAAAATCCCCTGTAAATCCCGGAGTTGTCAGAAAGCACGAGCGCCGGACGCGTCGATCTGTCAGTCACCGCGCGCGGCTTCTGCGAGAAGAGGAAGAAGCGGGAAAGTTTTTCACCTGGATTGCGGAGTTCATGGAGGTGGATCAGCAGGTCTTTCTTTCTTGGCTTGTGAAGACTCACGTTATAACTTGCATGGCTGCCATAATCTCTCTCTCTCTAACAATGCGGTTCACTGGTTACCATGTGAAGCTCACACAGCCCCACAAGAATGTGCAGGATCAGATCCTTATGACCCGCCCCACAGAAACGAGAGAGAAAACAAAAAAGAGAGGGATTAAGACCTGCCTGCAGGACCGAACGGAGAGGAGAGGGGAAACTCAAAAGTGGCTCTATTGATAGACAGTCTCAAAACTAGTTTCCAGTGAGAGGAAAATGCCATCTTGGCTGTCGTGATATTGATCCAGTCGTGTAAATTGCAGAGAGCAATTAGATTAGAAAAAAAAGAATAGTGTTAAAGTTTTAGCCGCTTTCAGGTCGTCTGACACTGAACATGCATCTCGTTTTCTATTGAGTATGAGGATTAATATAACGTGACACATACATCTTTGCGGTGTATAAAGGCAGCTTTAAATACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000301_00981124_00984214.mRNA True 1045 mRNA 0.44 2 980822 984612

Neighbor

gene id symbol gene type direction distance location
CI01000301_00942218_00944206 NA coding downstream 36404 941648 ~ 944418 (-)
CI01000301_00910345_00934727 NA coding downstream 46028 910142 ~ 934794 (-)
CI01000301_00851555_00904753 FAM13A coding downstream 76069 851405 ~ 904753 (-)
CI01000301_00759695_00763509 NA coding downstream 216914 759139 ~ 763908 (-)
CI01000301_00723145_00732453 CALY coding downstream 248369 722191 ~ 732453 (-)
CI01000301_00985983_00986183 NA coding upstream 1085 985697 ~ 986637 (-)
CI01000301_01040203_01048045 SPAST coding upstream 55514 1040126 ~ 1048045 (-)
CI01000301_01061298_01069683 PSEN2 coding upstream 76233 1060845 ~ 1069683 (-)
CI01000301_01082494_01085192 NA coding upstream 97314 1081712 ~ 1085573 (-)
CI01000301_01108934_01140005 JAG1A coding upstream 123460 1108072 ~ 1140031 (-)
G416511 NA non-coding downstream 68362 911735 ~ 912460 (-)
G416373 NA non-coding downstream 161744 796159 ~ 819078 (-)
G416376 NA non-coding downstream 163077 800139 ~ 817745 (-)
G416378 NA non-coding downstream 390262 582833 ~ 590560 (-)
G416571 NA non-coding upstream 6424 991036 ~ 991309 (-)
G416575 NA non-coding upstream 28578 1013190 ~ 1014387 (-)
G416539 NA non-coding upstream 34752 1019364 ~ 1022667 (-)
G416538 NA non-coding upstream 50690 1035302 ~ 1038330 (-)
G416550 NA non-coding upstream 70724 1055336 ~ 1058838 (-)
G416375 NA other downstream 149620 819748 ~ 831202 (-)
G416547 NA other upstream 68506 1053118 ~ 1054771 (-)
CI01000301_01756221_01772903 NA other upstream 787708 1755937 ~ 1772971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_001531 NA non-coding NC_007112.7 CM002885.2 50908384 ~ 50919371 (-)