G415775


Basic Information

Item Value
gene id G415775
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 46371 ~ 48046 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU477517
TATTTTGAAGTGTCAAAAGGTCATTCGGTTTAACCGTCCAAAGGCCAATACAGCCATTTTATTTGTGATTAAAATATCTTAAAATGTAATAAATGTATATATTTTTTATTCTGGCATGATTTTATAACATCATATATCAACAGTGCAACATGGTATTAAAATTATGTGTAGACGTCGTTGCTTTGTTATGAGAAAGAATGTCCGGAAAAATGAATTTTATTGATGTCATTCGGAGTAACCAATATAAAGGGATCATTTTGGATCAAGTCATGCGGTCAATATCATGTGACAGGATGTGACATCATTCAGACACCTGCAAAGGACCACATGGTCATGAAGCAAAGTAACTAACTCTCTTTTAACTATTTGAAAAATTCATGTTTTCACTTGCTCATACGCATGTCCCGAAACATCAGGTCATTCGGTACAACTGCTATAAAACATGGAAAATGTTGTAATATTTTAAAAACTTGTACTAAATATAAAATGTTTGATTGTCCTTTTGTCAGCTAACTAGCTAGCTAGATATCAGCCTGTTAGCATTATTTGAAAATATTGTCATTTGGTATAACCAAAAGTGTCATTCGGTAAAACCGAAATTTTGGTTAAACAGAATGACTTTTTTGTTGACAAATTTTGTCCATCTTGTAAAAAATGACAAAAGCAGTGTTAATTGATTATAAAAACTACATAATCTTATTGTTAACACTTAATAAAACTTCAAAATTAATTATATCTCCATTATGTTTTTTTACACTTTTAAAAATCTTATTCGTCAATGACCCATATATAACATTTTTGTGCTAACATTTTTAGAATATTATTAAAAAGACTACTTTAAACAAAAGTTCTATTAATGTTACTGGAAGAACATTTGTTAGCTGGGTAGCCTGTAAAAAAGTAACATGTAGTACAATTTAGCACGTTTTAAGTCCTGGAATGGCGTGAACACAGATAGACGGCACAATATGACACATTGCTTTTGTGGTCACTAATATAATTATGAGAAAATAATGAAGACCTGTAAGATTTATTGACTCACTTTTATCCTTGAAGCACTGCATTAATCTGTTTTCCTTTCAGGACAGTTTGTTTCTCGTTCTGCAAACATTAACTTCTCATCAGAGAGGGTGACTAATCTGCTTGAACATTAACTGTGTTTTGAAGATATACCTGACCACTCCTAAACACTGCTTTCATCCTAAACATACTGACCTTTGGATTACAATTACTTTAACTGAGCGAGACAGACTTCCTTTCAAACATCACTGTTTCAACACAAGTGTAGGAGGTCAATCACAACACCATCCCTTGATAAACAGCAGTATGGGGGCAATTATGTACAAAGCATCTAAAAATGATAAATTAATACCTCTGTAGGATACAGATATGTAGGGTTATATAAGATATATAATACTGTAGTTACTACGACAGTAATACTATATGTTATAGATTAGAAAGTTTTGTCAGTCACTAAACTTCACAAGCCATGTACAGTAACCATGTGTCTTACAGTATAATGATCTACTATCTAATGTGCCCACGCTTACCTGAACACACTAATAACAAGTGCTGACATGACATCATATAGTAACAGTGAACGTGTGTGTGACGCACAGAAAGTTATTCATTCAAAACCTCTTTTTCAGAATCAAATTATCAGTGTGCTCTCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477517 True 1676 lncRNA 0.32 1 46371 48046

Neighbor

gene id symbol gene type direction distance location
CI01000301_00010762_00033627 SLKB, SLK coding downstream 11841 10755 ~ 34530 (-)
CI01000301_00000013_00000244 NA coding downstream 45861 13 ~ 510 (-)
CI01000301_00188877_00193996 HADH coding upstream 140125 188171 ~ 193996 (-)
CI01000301_00196881_00204784 CYP2U1 coding upstream 148835 196881 ~ 205382 (-)
CI01000301_00205916_00210613 SGMS2 coding upstream 157276 205322 ~ 211560 (-)
CI01000301_00344929_00381428 TBCK coding upstream 296883 344929 ~ 381428 (-)
CI01000301_00448491_00464517 DKK2.L, DKK2 coding upstream 400184 448230 ~ 464843 (-)
G415774 NA non-coding downstream 15 46104 ~ 46356 (-)
G415777 NA non-coding upstream 4264 52310 ~ 52667 (-)
G415780 NA non-coding upstream 17154 65200 ~ 65493 (-)
G415781 NA non-coding upstream 18384 66430 ~ 66779 (-)
G416337 NA non-coding upstream 351851 399897 ~ 412270 (-)
G416423 NA non-coding upstream 472343 520389 ~ 520874 (-)
G416375 NA other upstream 771702 819748 ~ 831202 (-)
G416547 NA other upstream 1005072 1053118 ~ 1054771 (-)
CI01000301_01082494_01085192 NA other upstream 1033931 1081712 ~ 1085573 (-)
CI01000301_01756221_01772903 NA other upstream 1724274 1755937 ~ 1772971 (-)

Expression


Co-expression Network