G416571



Basic Information


Item Value
gene id G416571
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000301
NCBI id null
chromosome length 1891408
location 991036 ~ 991309 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU478469
GATTACCGGTCAGAATACCAATACGTGTTCATCAATGTGTTGATATGACTTAATTATTGTTTATATGATTTGTGAGCTTTTCTCTTGGATTGAATCTAAGCCACCCTTTTATTCCAGACAGAACTAAACAAATGAAATCATGAGCAGTTTACTCACTTATTAAACTGTGAAGCTATCCTCAATTTATACAGCTTTGTGAAACAGAAACATTTCCGTTTTGAAACTGCTGTAAAAGTTCCTACAGTTAACAAGCTAATGATGAACTATATTACTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU478469 True 274 lncRNA 0.32 1 991036 991309

Neighbor


gene id symbol gene type direction distance location
CI01000301_00985983_00986183 NA coding downstream 4399 985697 ~ 986637 (-)
CI01000301_00981124_00984214 NA coding downstream 6424 980822 ~ 984612 (-)
CI01000301_00942218_00944206 NA coding downstream 46618 941648 ~ 944418 (-)
CI01000301_00910345_00934727 NA coding downstream 56242 910142 ~ 934794 (-)
CI01000301_00851555_00904753 FAM13A coding downstream 86283 851405 ~ 904753 (-)
CI01000301_01040203_01048045 SPAST coding upstream 48817 1040126 ~ 1048045 (-)
CI01000301_01061298_01069683 PSEN2 coding upstream 69536 1060845 ~ 1069683 (-)
CI01000301_01082494_01085192 NA coding upstream 90617 1081712 ~ 1085573 (-)
CI01000301_01108934_01140005 JAG1A coding upstream 116763 1108072 ~ 1140031 (-)
CI01000301_01178856_01184335 ESF1 coding upstream 187547 1178856 ~ 1184335 (-)
G416511 NA non-coding downstream 78576 911735 ~ 912460 (-)
G416373 NA non-coding downstream 171958 796159 ~ 819078 (-)
G416376 NA non-coding downstream 173291 800139 ~ 817745 (-)
G416378 NA non-coding downstream 400476 582833 ~ 590560 (-)
G416575 NA non-coding upstream 21881 1013190 ~ 1014387 (-)
G416539 NA non-coding upstream 28055 1019364 ~ 1022667 (-)
G416538 NA non-coding upstream 43993 1035302 ~ 1038330 (-)
G416550 NA non-coding upstream 64027 1055336 ~ 1058838 (-)
G416375 NA other downstream 159834 819748 ~ 831202 (-)
G416547 NA other upstream 61809 1053118 ~ 1054771 (-)
CI01000301_01756221_01772903 NA other upstream 781011 1755937 ~ 1772971 (-)

Expression



Co-expression Network