CI01000304_00047400_00073206


Basic Information

Item Value
gene id CI01000304_00047400_00073206
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 46322 ~ 73338 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00047400_00073206.mRNA
GTATATATCTGCGGAGAATGTAATGAGAGGTTTCTTTAAGAAACGTCAGGTGGCATCATCGCGCGTCTGTATGAATGTGCGAGCACGCGCGCGATGACGAAGTCACAGAGTTTCGCTGCATGTGTGTGCGATTGCCGTTCGAGTGTAATTTGATATCATCCAGGTACAGATCTCTATGTATAACGCTTTTATGGAAGTGTATAATTGCTGTTTACTGGAAGATTGCCTCGAATGTCGATTTATGTCCATAGGGAGTTGGATGTTAACGCAGGATTGCGTGGATGTGAGTGTGGCTGAGCTACCGCACTGCATATACAGACGAGGCCTGTTCGCGTGGAAGAAGTGTTATATTAGTGTGTAACATCAGAAACACAGGAAAAAGTGAGTAATATACACACTGTCATTTCAGGTGTATTTAGTGAGTGTTATTGTAGTCTAAATGTATGTGCAGTTTTAAGATGTTATGTTTTCTTTATAGTGCCACTACCGTATTATTATTGCTGGTGTTTTATTTTTGACATTGTTCTTCATTATTGCACACAAGAAGAGATGACAAATTGTATGTTATGCTATTTTTATTTCGGGGTGAACAATTTGCTGTGTAATCCAAAGATATTCTGACATTGTATTTTGGTTTGTTCTGGGTTTTTCACCCCACATACCTAAACAAAAAAAATACAAACTCCTAACTGATTATAAGGACTAAAATACGAACCTCACTCATATTTGTTGGTCCTGAGTATCATTTTCCTGTGGCCACAATTTTGGTACCAGGAGTGGGGTATTCCAAGAGAGTTGGGAGAACCAAGTTTTTTTCATTGGTGTGTGCAATATAAGGGAAATGTAGTAAAATAATACGGTAGTGGTGAAGAGAAGACTGAAGATTCCTGCAGGCGAGGAGAGACTGTTGCGGCAAGGAGACAGACGGACCATCGTGGAGCATCGCAGGGCCTAGCTCGATCTCATTGGCCGGGGCTAAAAGATTATTTGACAGCTGTTGCATCGGATCAGAAGGACTTCAAGCACTTATCCTTTTCAGAGTTTTGCCTAGAGACTTTTAAGGACTTGAGATTTCACAATGTCAGATCCAGATGATGACCGTAGCGGTGCTAATTTAGCAGAACAAATCAGATATGAAGATCATGGTGGAGCTAATTTAACAGATCAAATTAGAGCGTTGCAAAAGAAAGGCACATGTTACCATATTGTGGTGATGGAGAAAGACGGCAGGTCAGTTGATGATTTTATAGAGGAAGTCGAGCGGGTGCTGTATGCTAGGCATCAGTCTGACCAGGATCAGTATGATTTTGTTATGTCTCTGTTAAGGGGCACGGCCTTGGAAGAGGTGCAAGAAAAAAGAAGTGTCACCTTAGAGGATGTTCTTGAAGTGGTAGCAGAACAAGGCAAAGCAATTAGTGAACTGACTCAAGCCGTCAAAAATCTGGCTGTAAGGGGTGGTAGTACAAGGGTGGAGACCTCTAGGCCTAGGTCACAGCCAAAATTCACTGAGGATGGACAACCGATATGTTTCAAGTGTCAAGTCGCAGGACATTTGTTGCAACGTGCTGTGGGTACGTGTCCTGTGGTAGAGCTTTCAATTTGTGGTGTCACTACTAAAGGTCTATTGGATACAGGCAGTCAGGTGAGCACAATAATGGAGCAGTTTTTTAGAGACCATTTGTGTGGTAAAGATGACGACATCCTCTCCATGGCTGGTTGGCTAAAGCTCACAGCGGCCAATGGGCTTGACATACTCTACCTGGGTTACTTAGAGCTTGAGGTGGAGGCCATGGGAATTAAATTGCCAGATTGTGGCTTCCTAGTGGTCAAAGACGTTTCTAGCCCTGGAAACACAGTGCCGTGCATCCTAGGAATGAATATAATCAGCCGATGTACACAGGCCGAAAAATGGACAGAGCACATACCTGCGGAATCGGTTGTGACAATTAAAGCGACGGGCTTCAATAGGGGCGTTGGGGAAGGAAGTCCTATGTTGTTAGAACCTCTTAGTACCCCATTGCCAGGAGGTCTGGTAGTCATCCCCACCCTCGTTGACTCCCACTGTCCCTGCATACCTGTTAAAATTCTAAATTTTTCTCATGAGGACGTGTGGTTGTCACCCAGGACCCGGCTGGGTATCCTGTCAGAGGTGGAATGCGTGAACAGCTCGGAGCAGTGTGAAGTAAGATTTCAGCGGATTTCGGCAAACCTTGAACAGGTGACTTTAAATATGAAGGATGAGCAAAGCAGAGACCGTGTGCAGGAAATCTTGGATAAGATTGATGTAGGAGGAAGTGAGTATGAGCAAGCTCAGCTCAGGTCATTGTTGAAGAAGTACATTGACATCTTTGCCCTAGAGGATGAGGACCTAGGCTATACAGACAAGATCACACATGAAATTCATTTATTTGATGACGAGCCGATCACACTGCCTTATCGTCGAGTTCCTCCTAATCAGTATAGAGAAGGGAAGGGTCACATCTCACGGTTGGTAAGGAAAGGAGTCATACGAGAAAGTAATAGTGCCTACGCATCGCCAATCGTGCTGGTACGTAAAGCAGACGGCAGTATCAGGCTATGTTTAGATTACTGTAAACTAAATCAGAAAACCAAAAAAGATGCCTTTCCCTTACCTCGAATTGATGAAAGCTTTGATGCTCGGTGGGGTGCGCGTTACTTCTCAACAATTGATTTAGCAAGCGGCTATCATCAGGTGGCCATGGCAGAAGGAGACAGGCACAAGACGGCTTTCTTGACCCCTTTTGGCCTCTATGAATTATTGCGGATGCCGTTCGGGGTCTGTAATGGACCTGCAACCTTCCAAAGACTGATGCAGGACACCATGAATGATCTTGTTTTCCAGATTCTGTTAGTCTACCTAGATGATATCTTGGTGTATTCCTCAACATTCCAGGAGCACTTGGTTAGGCTGGAAACAGTACTAAGGAGGCTGCAGGACACTGGTCTCAAGATAAAGTTAGAAAAATGTCACTTTCTTCAGTCAGAGGTTGTGTTCTTGGGACATCAGATATCGGCCGATGGTATTGGCACAGACCCTCAGAAAGTGGTAGTTATAAAACAGTGGCTGGTTCCGTCTACGGTAAAGGAATTAAGATCCTTCCTTGGACTCTGTAGTTACTACAGACGGTTTATTCAGGGGTTCTCAAAGATAGCTGGCCCACTTCATGGCGTGGTGAATTCATGTCTGACCACTGAAAGCCCCAGCAGAACTAATGTCCTTTTGGGGAGTCTGTGGACTGAAAAATGTCAAACCGCTTTTGACACTTTCAAAGATAAGCTTACTAGTGCGCCTGTTTTAGGGGTGGCGGACTATTCAAAACCCTTCATTGTGGAGACAGATGCAAGCAGTCAGGGACTGGGCGCTGTTTTATATCAGCAACAGGGAGATGTAAAATGTGCCATTGCCTTTGCAAGTAGACGGCTGAAATATGCAGAAAAAAATGATAGAAATTACAGCAGCATGAAACTTGAGCTCCTTGCTCTCAAGTGGGCGATTGTTGAGAAGTTTCGGGGGTATTTGTTGGGGTCCAAATTTACTGTGATAACTGACAATAACCCTCTGTGCCACTTGAAAACAGCAAAGTTTGAAGCAATTGAACAAAGGTGGCTTTCGCAGTTGTCCGTCTTTGATTTCGATGCCCCGGACGATACTGGACATCGAAACACAGTAGCTGACACACTATCTAGACAACTGTTCGCAGGGGAGCCTGAGCCGGCTTCGGAGGATGCAGAGTATGATGGATGTGTGGCAGTCTGTAGTTGGATTCACCGTAGTACAGAACTGGACCCTGCACTTGTGGCTGCTGGGATATACAGCTGTAAACAAGACTTTGTAATTAGTGGATTCAGGAAGTTTTGGGATCAAAAGAGAAGGCCTCATGGGAAGGAGCTAAAAGCTCTGCCAAAACCTGTTCGGTCAATGTTGAAGCACTGGAACAGCATCAGGGAGCGGCAAGGTCTACTGTACCATGTCTTTGAGGATGTCAGACATGGGGAATGTTATCAGTTTTTTTTACCTCTCAGCTTGAAGAAGTCTGTCCTGGAGTATGTGCACAATTCTATGGGGCACCAAGGTATCGAGCGTACCCTTCACTTGTTGAGGCGCAGGTGCTTTTGGATAGGGATGCACAATGATGTGGAGAAGTTGATAAAAGATTGTCAGCGATGTGTGATGACTAAGCTGCCGCAGTCAAGGGTCCACCCTCACATGAAATCGTTTCTGGCTTCTAGACCTCTTGAGGTAATCGCTGTGGACTTCACAGTCCTGGAACATCCGACGGCCTTCCCTACCCGAGATCAAAAAGCAGACACCACTGCCAAGGTGCTGCTTAGGGAGTGGTTCATGAAGTATGGTATTCCGACATGTCTGCATTCTGATCAGGGCCGTAATTTTGAGAGTGAGGTGGTGGCTGAACTTTGTAAGCTTTATGGAGTGAAAAAAAAAAAAGAGCCGCACCACGCCATACCACGCTATACTGGCAACGCTCAGTGTGAGCGGTTCAACAGGACGCTACATGACCTGTTGAAAACGCTGCCACCTGAAAAGAAACGCCGATGGCCCAAATACCTACCAGAGTTGGTTTACGCATATAATGCGACACCTCATGCAACTACTGGCTATTCTCCATATTATTTATTGTTTGGAGTTGATCCTTACCTGCCTGTGGATTCCCTACTGGGACAAGAGCAAATTGTAAACCAGAAACACGACTGGCTGTTGGTCCACCAAAGGCGTCTGAATGATGCACATGCCAGGGCAAGGCAATATTTCGAACAAAAGGCTGCCGAGCGTATTTCATTGGACAAGGATAGAGTCTATTGCCCAAAGATTGAGATCGGGGCGTTGGTGTACCTGAGGAACAGACCAGTAGGCCGTCACAAAATACAGGATGCCTGGGGGCCAATCGTATATCGAGTAGTAGGGATTGTGGACAACACCTATAAAGTGGAGCCATTAGAAGGAGGGCCTGCAAAGAGAGTTAACAGAGTTGATATCAGGCCCTGTGTGAATCATCCTACTCCCACTCCTAGGAGAAGGCCAAAGGCACAGGAGGAGAAGTCCGAGTCCCATAGCGAAGTGGAGTCCGAGGATTCGGAGGAGGGTGTAGTTTTAAAGGAGGAGAGAACTGGTGTGCCTGCAATAAGAAATCTTAGTACCCAGTCTGTTGGCAAACAGGGTAGGGAGCATGCGCCCAATGTGGTACTCAGCAGAGAATGGGTTGATTCTGCTCATGTCGATGTTTTATCAGAGCCTGCTGATGCCTTGGAGACTGAGGAAAGGCTGGATGCAGCTACTAGTGTGTTAACTTGTCCTGTTGCTGCACCACGCCAACATAGTAGGAGGCCAAACGCTGGACAGCATTCAAATTTGCACTATGAGCCAAGGTCTGTAATCGAGGACGCTTACCCTGACGCAGGGGAGAATGTAACCAGCTCGTCCACCATCCTTATACTTTGTTCACGGCCGTACAAACAGGAACACCTGCATATGCTGTTGCAATGGAGCCCCCACCTGTCTCAAACCTGCTTCGCAACCAGATCCTCTCAAGTACGGATGAAGATTTGGCTTCTCTTCTGTCTCCTATTCCGCAAAAAGATTGCGGAATAGGATCTCATATACACAAACTCCTCAGTCTTGGTCATTAGACAGAGGCGATGACTAATACTTTTAGACGCCGCACCATGCTTGCTTATTTCTAAAAGTATGTTATTTAGTCCCCATAGATCTGAACACACTGAA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00047400_00073206.mRNA True 5761 mRNA 0.46 8 46322 73338

Neighbor

gene id symbol gene type direction distance location
CI01000304_00292894_00306187 PHAX coding downstream 219556 292894 ~ 306479 (+)
CI01000304_00308220_00310793 NA coding downstream 234335 307673 ~ 311267 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 241404 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 296995 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 351365 424703 ~ 435066 (+)
G417907 NA non-coding upstream 533 45537 ~ 45789 (+)
G417904 NA non-coding upstream 20078 26033 ~ 26244 (+)
G417900 NA non-coding downstream 13622 86960 ~ 89259 (+)
G417937 NA non-coding downstream 61508 134846 ~ 135133 (+)
G417939 NA non-coding downstream 63796 137134 ~ 137631 (+)
G417941 NA non-coding downstream 65875 139213 ~ 139451 (+)
G417942 NA non-coding downstream 66194 139532 ~ 139853 (+)
G417987 NA other downstream 153365 226703 ~ 227853 (+)
G418059 NA other downstream 484754 558092 ~ 564451 (+)
G418116 NA other downstream 799332 872670 ~ 875249 (+)
G418981 NA other downstream 2019156 2092494 ~ 2093678 (+)
G420445 NA other downstream 4229998 4303336 ~ 4303832 (+)

Expression


Co-expression Network