CI01000304_00140443_00163606


Basic Information

Item Value
gene id CI01000304_00140443_00163606
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 139690 ~ 163683 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00140443_00163606.mRNA
ACTTCTGGACTCCCTTATTTTCATGACATGGTGTCAGAAGTTGTTGACATGAGTGCAGTCTGACCCCTGTCCACAAAATGGCAAAGTTTAATCCTCTGGAGTGGTTTTCTTTCGACAGTCCCTCGGAATGGCCTGAATGGAAACAGCCATTTTGTCGCTTCAGAACAGCAACACAACTAAACAAAGATGACGGCTCAGTACAGGTCAGTTCTCTAGTCTATGCAATGGGAAGTGAGGCAGAGAAGATTTTAGCTTCCTTTAGCTTTGATAATGAGGACAAAGAGAAATTTGATGTTGTACTGGCGAAGTTTGAAGAGTACTTCATACTGAAACGGAATCTAATACATGAGTGTGCATACTTCTATCAGAGAAACCAGCTACTGGAGGAGAAAGCAGTGACATATATTCGCTATGAACTTGCCGCTTATTGTGAGTTCTGTGACAAAAGAGATGAGCACATTTGTGACTGGCCGATGAGCTGTATGGAGAAAGAAGGCATCATTGACAAAGTAACTGAGCTGACGGAGTGGTACACCTTCAAACTTCGGATTACAAGTGCCCAAGTAATCTTTCAAAGGAAAGTGACTGAGACATTACAGGGGATTGAGGGGGTGGAAATTTATATGGATGATGTTCTGGTTTTCACGGGAAAGAACATGATGAACGACTTGAAAGAGTACTGTCATGGAAATGGCCGGACTAAAATTGAACAAACAAAAATGCAGGTTGAAACAAAATCAAATTCTCTTCTTGGCCACATCATCGATGCACAGGGGGTGAGGCTGGACCCTGGAAAAGTCAACAGTATCACTAACTTTTCAGTACCCCAGAACGCACATGAACTAAAACGACCCACAGCAGTTTCTGCAGATGCAAGAAGCTACGGGGTGGGAGGCGTCCTGCTTCAGAAAGGTGATGGTGAGTGGAAACTAGTGGCATACTGTTCAAGGCACGTAAGTGATGATGAAACAAGCCAAGTGATTGAGAAACTCAAAGCCACCTTTGCACATTTTGGGATCACACATGAGTTGAGAAGTGACAAGGCCGACAGTTTTTCTAGTAAAGAATTCAGAGACTTCAGTTCTGAATACGGCTTTGTTCATGTTACTTCAAGCCCACACTTCCCACAGAGCAATGGCCATGCGGCGAGGGCTATACAGGTGGCCAAGAACATTCTGAGACAGAAAGACCCAGTGATGGCTCTCATGTCCACCCAGTCACCGTCCACTGGGTTCAACCCAGCAGAACTACTCATGGGGAGGAGGATTAGAACCACACTCTCTACACTGGAAGAGAACCTAAAACCAGCTTGGCCAGAAGATGAAAAAGGGACCATTCAAGGTTCTTTTTCAACACCAAGGCCTTATGTAGTGAAAATGACGGAAAGAAAGCTGATCAGGAGAAATCGGTGTCACCTTCAGAAGGAGCGCACTCCTTCAGCAACACCCGAATGCACAGTGGTTCCTGAATGCATTGATCTTATGGATTTCGATGGAATAAGTGCACATAAACAGGCACAGGACACACCCACCTTAACACAAACCAGGTATCAGGGCATGCAAAAAGAAAAAAAGATTGCCGCATCTAAAGAGAGTTGTGAGCCAGAGAAGACGAAAAGATCGGAAAGCACGTCAGTGATGAGTCAACCCGAGACGCTGATGAAACTTAAGTCACCACCTCCAGAGCAGGAACAGATTGATCTTATCTGCAAGCATGCACTTGAGCGCCACAGAGTTGCTTTGTATGGCACACAAATTACTTCAGTCATAGACCTCTTGATGTGTGCCCACGAGCTGGACTCCACTCTCGGCCCTGACAGCCATAATGAACCAGTGTTACAGAAAAGCAAAAACATGCGAGAGACTTGTTTCAAATGTTCTGCTCCTGGTTTCACATCTAGAAACTGTCCCAACTGCAACTTTGCGCAACAGACTGTGTCTTTTCCAGCCACTGACAAACAGACAAGTCCAGTTTCGAATGAGCCACAGAACCCTAGGGAGGAGGCTAAAGCCACGACATATGCAGAAATGGAGGAGCAAAAACAAAATTCTGTTCAGCAGCAGGCCATTGACGCAGCGCTGGACACAGGTGCCTCACTTTCGGCAGTTCTTACAAACATGATTTCTGATGTCTTGCAACATTCTCAGAAGGTTCAACCTTGGACTTTTTCCCCAATTCAGCTTGCCAACAGTGCTGTTTGCACTCCGACTGGTATTGTCTGGTTAAACGTTAGCCTCCAGGGTAAAAATTTCTACCATTGTTTTATCCCTGATCTATCCTCTCCACTCATCCTAGGGATGGATTTTATGCTACGAGTGTCGGTTAGCGTTCATATCCCATCAAGGACAGTGACCCTCGGTGAACCCACACCACAAGAGGTTTGGAGTGAGTGGTTGGAAGCACTTGAGCTTGGAAGCTTGATGTTCTTGGATGTCTCCCAGTCTGCCTTGGATGAGAAAGTTGAGATGGCTTGTCTGAAAACGGAACAGAAAGAAGATTTGAGGGACCTTCTTAAAGACTTTTGGAGCTTGTTTGACAGAGACCTAGGGCATACCTCATTGGGCGAGCACGAAATCAACACTGGTGATGCGACCAGTTCACCTCCCACCATACCGGAGCTCACCAGCTAAGAAACAAATAATTGAGGATCAAATTCAGATGATGCTTGAAGAAGACATCATCAAACCCTCTTCCAGTCCATGGGCAGCACCTGTAGTAATTGTCAAAAAGCCATGTGGAGACCACAGGTTTTGCGTAGACTACAGAGGCCTTAATCCTCTGACACACAAGGATTCGTACCAACTGCCCGGAGTCGACGAATCATTGGACTTCCTGGCTCGTGGAAAATTTCTTTCAACTCTTGATTTGGCTCGTAGGTACTGGCAGGTGTCAGTGGAGAAACAGTCAAGACCAAAGACAGCTTTCGCATCACACTGTGGCCTATTTCAATTCAAGGTTCTCCCTTTTGGTCTCTAACGCCTCAGCTACATTTCAGAGGGTAATGAACAATGTCCTCGCTGGCTTGGTCTATAAGTGCTGCGCAGTGTATCTTGACGATATCATCGTTGCATCTCCAACCTTTGAGCAGCACTTGGAAGACCTCTGAGAAGTCCTGTCAAGACTAAAGTCAGCTTGTCTTACTCTCAAGCTGAATAAGTGTCAATTCTGTTTGAGTAAACTCGTCTTTCTAGGATACAGGGTCACTCCGGTTGGTATTTCTCCTGACCCGAAAAAGCAGTCACAGATTTCAGAACGCAGACAGATATGAAACAAGTGAGAGGATTTCTCGGCCTCACAAGCTACTACAGACGGTTCATTCCGAAATATGCAGAGAAAGCCAGGGCTCTATGCTAAATTTTCAATTTTCAAGTGCTCCTAATAAA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00140443_00163606.mRNA True 3383 mRNA 0.45 9 139690 163683

Neighbor

gene id symbol gene type direction distance location
CI01000304_00088915_00116828 NA coding downstream 22862 88164 ~ 116828 (-)
CI01000304_00167148_00268194 ALDH7A1 coding upstream 3465 167148 ~ 268194 (-)
CI01000304_00348539_00351333 NA coding upstream 184812 347671 ~ 351333 (-)
CI01000304_00670372_00671143 NA coding upstream 505593 669276 ~ 671143 (-)
CI01000304_00682765_00692613 NA coding upstream 518826 682509 ~ 692656 (-)
CI01000304_00748608_00750261 NA coding upstream 584632 748315 ~ 751532 (-)
G418314 NA non-coding downstream 7708 131766 ~ 131982 (-)
G418300 NA non-coding downstream 93965 45503 ~ 45725 (-)
G418295 NA non-coding downstream 113446 26033 ~ 26244 (-)
G418291 NA non-coding upstream 14442 178125 ~ 251292 (-)
G418276 NA non-coding upstream 121632 285315 ~ 342503 (-)
G418271 NA non-coding upstream 129223 292906 ~ 306910 (-)
G418280 NA non-coding upstream 160667 324350 ~ 330891 (-)
G419353 NA other upstream 2065701 2229384 ~ 2236106 (-)
G419354 NA other upstream 2098819 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 4100062 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 4498133 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 6313768 6480743 ~ 6483986 (-)

Expression


Co-expression Network