CI01000304_00308220_00310793


Basic Information

Item Value
gene id CI01000304_00308220_00310793
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 307673 ~ 311267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00308220_00310793.mRNA
CTATAAAAGACAGAATACATTAAATGTTCATTGATTAGGCTATGACGTTGTTTACAGTTTACTGGAGGGACGAGCACGTGCGTACTGATGTTACTTTCAGCGGGTTTTTGTGCAGTTTGAATTTTGTCTCAACTGCACCGTTGAACCTCTGATGACGTTGCCGTTGCTGATTGAGTGTGTGTGGTCACGTGTCGGCGTAGTTCTGATGAGCGGCCATATTAGTTCAGTTCATTCTTTCACGCGACTGTGTTCATAGTAAGACGCGCTCACATAACGTTATATTCATTATTTTATATTTTACAGTGATGTTAATGTAGGGCACTGCAGTGTTTAAAGCAGCTCTAGAGTTACATCCTGTTTGCTCGGAGCGTTTCAATACTTTTCAGTCAGAAGGTAAATCGTTTTTGTTGTGCTCATAATCAGCGTTGATTCAGTTGATCGGATTGTTAGAATTCAAGTTAAATGCTCTTTTGCTCACTGAGCTGAGGAATGACCAGACATTCATAATTAACACTGAATTTTGTTTTACTCAAAATTAAGCTGAAGAATGGCGAGCGCGGCGTGCACTCCGGCCGGACAGCAGTCCTTGTCCCGCGGCAGCAGCAGCACTCCACTGAGCCCCGCGCGGATATCCAGACTGCAGGAGAAGGAGGATCTGCAGCAGCTCAATGACCGGCTGGCTGCTTACATCGACACGGTCCGCAGTCTGGAGTCCGAAAACAGCGTACTGCAGCTACAGATCAGCGAGCGAGAGGAGATACGGAGTCGCGAGCTTACCGGGATCAAATCGCTCTATGAAACCGAGCTGGCGGACGCGCGCAAGGCGCTGGATGACACGGCGCGGGAGCGCGCGAGGTTGCAGATCGAGCTGGGCAAGATTAAGAGCGAGCAAGAGCAGCTACAGTACACACTGAAGCGTCTCATTGGTGTGGAGCAGCTGGAGGATGTGAATGTTCACCAGCTGCTTTACCAGTTTCGGTGTGAAGGGGCTCTTTGTTTCAAATCTTCTCTCTGGACTGAAGCAGATAAGCTAAATGTAGCAAATATTAAAAAGAGTCCAGAGTATTATAAACAGAAACTGACAGCTCACGTCCTCCAGCCGCTCTCTGCTGTGTGTGAGACATTCCTCACATTCCAGCTGCATTCCACAGTTTCTCAGCTCACCTCCAGAGAAGGAGCTCGGCGACTGCTCAGTGCTGCAGGAGTGCATGGCACAGAAAGAAGAGTTTGAAGACCTGTAAACACACATTGTTCATCAAACTTCAGTACGTTCTCTCATTGGATAAATGGTGTTTTTGGTCAGTTGTCATTTAAATAACTTGCTGGTGTTTGAAAGTCAGTTTAAGCTGAGAATATAGTTTTAAATTTCTTGAATGACGTTGATACTGACCCTGTCCTGACTGATAAACTGTGCCTTTGTTCATGACCACTCCTCAAGCTCTAGTTGGCCCACTTTAGACCAAGGTAATCAGCAGGCCATAAAAACTTCTGGCTGTTGGCCCCGAGGAAGTCCCAAAGAGGCACACTCATGGAAACGCACCTGGCCCTTGCATGCTTTTTGGAGCATTGAAATTTATTTCACTGAATGGATATTCAGTCATTTACTCACCTTCATAATCCTGTCCCCCTTTTTTTTAATCGGGATGTGCACGGATACTTGAGTACTCTGACAGCGAAGATCGATCATGAAAACGACTTTAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00308220_00310793.mRNA True 1705 mRNA 0.46 2 307673 311267

Neighbor

gene id symbol gene type direction distance location
CI01000304_00292894_00306187 PHAX coding upstream 1194 292894 ~ 306479 (+)
CI01000304_00047400_00073206 NA coding upstream 234335 46322 ~ 73338 (+)
CI01000304_00315935_00342330 LMNB1 coding downstream 3475 314742 ~ 342531 (+)
CI01000304_00370333_00419672 MEGF10 coding downstream 59066 370333 ~ 420755 (+)
CI01000304_00424703_00434890 PRRC1 coding downstream 113436 424703 ~ 435066 (+)
CI01000304_00453663_00453991 CTXN3 coding downstream 142396 453663 ~ 455240 (+)
CI01000304_00480135_00531529 NA coding downstream 168514 479781 ~ 532037 (+)
G418023 NA non-coding upstream 26647 279893 ~ 281026 (+)
G418024 NA non-coding upstream 29691 277261 ~ 277982 (+)
G417901 NA non-coding upstream 39463 168520 ~ 268210 (+)
G417984 NA non-coding upstream 83754 223015 ~ 223919 (+)
G417963 NA non-coding upstream 143001 164220 ~ 164672 (+)
G418047 NA non-coding downstream 129317 440584 ~ 440872 (+)
G418050 NA non-coding downstream 158948 470215 ~ 470572 (+)
G418056 NA non-coding downstream 167412 478679 ~ 478899 (+)
G418004 NA non-coding downstream 210417 521684 ~ 526522 (+)
G418003 NA non-coding downstream 239006 550273 ~ 551981 (+)
G417987 NA other upstream 79820 226703 ~ 227853 (+)
G418059 NA other downstream 246825 558092 ~ 564451 (+)
G418116 NA other downstream 561403 872670 ~ 875249 (+)
G418981 NA other downstream 1781227 2092494 ~ 2093678 (+)
G420445 NA other downstream 3992069 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4861956 5173426 ~ 5176791 (+)

Expression


Co-expression Network