CI01000304_00348539_00351333


Basic Information

Item Value
gene id CI01000304_00348539_00351333
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 347671 ~ 351333 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00348539_00351333.mRNA
ATGTGCGTAACACACTGTACGATGATACATGGATGTTCACAGTGATCAGGGTAATAATGGTATTCGTGCATGTAATTTACAGTCTTACAGTCATGTTGCTCTTCCAGAAGCTCTTCAGTGTTGGCAATCTCATCAGACACCTCTGCACCAGAAAACAGCTGCCCATCCTCACACTCTTCACAAAGGACCCGTGCCCTTTGTGTGATGAAGCAAAAGAAGCACTTGAGCCGTATAAACATAGGTTTGAGCTGCTGGAGGTTGATATCACCCTTCCGGAGAATAGAGTCTGGTTTGACAGATACAGATATGACATCCCCGTCTTTCATTTAAATGGACAGTTTTTGATGATGCACCGTGTGAACTCAACACTCCTTGAAAGGCGCCTGGATAAAACGACTGCAACTGAACAATAATATCTGGAGATGTTATGCATTGTTTTCTCTTCATTTCAAATAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00348539_00351333.mRNA False 457 mRNA 0.42 3 348495 351333

Neighbor

gene id symbol gene type direction distance location
CI01000304_00167148_00268194 ALDH7A1 coding downstream 80301 167148 ~ 268194 (-)
CI01000304_00140443_00163606 NA coding downstream 184812 139690 ~ 163683 (-)
CI01000304_00088915_00116828 NA coding downstream 231667 88164 ~ 116828 (-)
CI01000304_00670372_00671143 NA coding upstream 317943 669276 ~ 671143 (-)
CI01000304_00682765_00692613 NA coding upstream 331176 682509 ~ 692656 (-)
CI01000304_00748608_00750261 NA coding upstream 396982 748315 ~ 751532 (-)
CI01000304_00843412_00844705 HINT1 coding upstream 491962 843295 ~ 844705 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding upstream 501613 852946 ~ 861367 (-)
G418276 NA non-coding downstream 5992 285315 ~ 342503 (-)
G418280 NA non-coding downstream 17604 324350 ~ 330891 (-)
G418271 NA non-coding downstream 41585 292906 ~ 306910 (-)
G418291 NA non-coding downstream 97203 178125 ~ 251292 (-)
G418314 NA non-coding downstream 216513 131766 ~ 131982 (-)
G418372 NA non-coding upstream 90639 441972 ~ 442201 (-)
G418387 NA non-coding upstream 118908 470241 ~ 470460 (-)
G418391 NA non-coding upstream 195141 546474 ~ 549437 (-)
G418441 NA non-coding upstream 229028 580361 ~ 580717 (-)
G418450 NA non-coding upstream 251820 603153 ~ 603576 (-)
G419353 NA other upstream 1878051 2229384 ~ 2236106 (-)
G419354 NA other upstream 1911169 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3912412 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 4310483 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 6126118 6480743 ~ 6483986 (-)

Expression


Co-expression Network