CI01000304_00846138_00850133


Basic Information

Item Value
gene id CI01000304_00846138_00850133
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 846059 ~ 850379 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00846138_00850133.mRNA
CTTTAAAAGCAAATAAATGTTCCACTGTAGGTCAGTAAATATGTTCTGAATATATTCTAAATATGTTGTTTCTCATATCATGAAGACGTCTGACTATGCTGAAAGCGTGTTAAAGCCGAGACAGAACTCGTTGCTCCAGCAGAAAATTGAGCGACACCATCGCATGACAGGAGAGACCTGGAAACTCAGCCAAGGGTTAACAGTCGGGGTGAGCAAACTCATCCACATATCACTAGTGTCACATGCTGCAGGACAGGGGGAAGAGGATCAGATGTGTCTTGATGTCAATGTAGACGAGAATCCTAATCAGGGAGCCAGGAGGAGACGGAAGCTGCTGCAGACTGTTACTCGAGATCCTGTCCAAAAGGAAGCACCCAAGCAGAAGAAGGTCATAGTTTTGCCCGATGAGCCGTCAGAAGACACCGAGGGGGTTGTAAAAATAGCTCTAAGATGTCCAACCAGAAGAACGATCCACCGGCGATTCCTCAAAACCTGGAGCTCGATGCTCCTCCTTGACTGGATGATGAAGACAGGATACCATCCTGCTCTCTACACGCTGTGTACATCCTACCCCAGGAAAACCCTGCTGATGGCTGCAGACGTGAGCCTGGAGGAGGCTGGGATTCTCACTGACACACTGCTGCACGTGGAGGAGAAAGAGCTGTCCGTTACCTAAGAGCACTTCTGTTTTTGAAATGCTTTAATGGGACTGAATGGATATCAGTATCAGTGCTGTAACATCGTGCACCAATCAAAAGGACAGAATTGGGATACATTCATTGTAACTCTTCACTTTTGCTCTTCAACTGGCATATGGATGAATCTTACAGCCTGTATGCTGATCTTAGTTTTTCTATAAATACATGAGAATAATCCTGTTCAGATACAATGTTTTTTAAATCAGCAAAAAAAAGTAATGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00846138_00850133.mRNA True 922 mRNA 0.45 5 846059 850379

Neighbor

gene id symbol gene type direction distance location
CI01000304_00772995_00827316 CHSY3 coding upstream 18451 771033 ~ 827608 (+)
CI01000304_00757894_00760456 NA coding upstream 85399 757894 ~ 760660 (+)
CI01000304_00728178_00731945 ISOC1, ISOC1.L coding upstream 113785 727956 ~ 732274 (+)
CI01000304_00695426_00725459 SLC27A6 coding upstream 120600 694461 ~ 725459 (+)
CI01000304_00480135_00531529 NA coding upstream 314022 479781 ~ 532037 (+)
CI01000304_00884782_00917034 WRN coding downstream 34111 884490 ~ 917034 (+)
CI01000304_00933179_00942864 NA coding downstream 81419 931798 ~ 943865 (+)
CI01000304_00962923_00975418 NA coding downstream 112374 962753 ~ 975644 (+)
CI01000304_00983004_01018406 NRG1 coding downstream 132533 982912 ~ 1018693 (+)
CI01000304_01173248_01184405 SH2D4A coding downstream 321758 1172137 ~ 1184529 (+)
G418156 NA non-coding upstream 152456 693350 ~ 693603 (+)
G418149 NA non-coding upstream 178576 666617 ~ 667483 (+)
G418148 NA non-coding upstream 181442 664260 ~ 664617 (+)
G418145 NA non-coding upstream 192156 653652 ~ 653903 (+)
G418142 NA non-coding upstream 201498 644260 ~ 644561 (+)
G418180 NA non-coding downstream 76126 926505 ~ 926772 (+)
G418192 NA non-coding downstream 194537 1044916 ~ 1045411 (+)
G418195 NA non-coding downstream 197019 1047398 ~ 1047599 (+)
G418196 NA non-coding downstream 197879 1048258 ~ 1048495 (+)
G418197 NA non-coding downstream 199240 1049619 ~ 1049865 (+)
G418059 NA other upstream 281608 558092 ~ 564451 (+)
G417987 NA other upstream 618206 226703 ~ 227853 (+)
G418116 NA other downstream 22291 872670 ~ 875249 (+)
G418981 NA other downstream 1242115 2092494 ~ 2093678 (+)
G420445 NA other downstream 3452957 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4322844 5173426 ~ 5176791 (+)
G421162 NA other downstream 5390854 6241233 ~ 6242997 (+)

Expression


Co-expression Network