CI01000304_00862451_00870277


Basic Information

Item Value
gene id CI01000304_00862451_00870277
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 862153 ~ 872429 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_00862451_00870277.mRNA
AGTGTCTGAACAGTCACAAGGACAAATGTGTAGAAACCGTAAAGGATACAGATCATCTGACTGTCTTGATCTATTTCGCATTGTTTTTCTAGTGTGTTCCGCATATACTGAATCTTAACTCTAGTGCTCTTCCAATCGTGTCAGGAAGAAATATCCCTCTGACTCAGGGTCATTTGAGCTTAAGCGCTGAGCCATGGTTTCTGATAGCTGCCTGATAGCGCTGGCCTTTTCTTTCAGAAATACTGGTTATTTAGTCACATAATTGCAGCAAGGAATTGTTTTCATCTGCATTCATAGGATGTGTAAGTATTTTAAGAACTTTGTTAGAGATTCAAATCATTCTCAAGAAGAAGAAAAACCCACAAAAAAGGAAGCACAGAAAACGGCAGCTTCAAATGCGGGTGTGATGATGGGCGTAAACGTTGTAAATAGAGGCTTCTCTTTCTGAGAATGATGGTCAGTTGGTGCACAGCTTCAAGTAAAAAAAAGCATTTCCTCTATTGCATAAATGATCTAAAGTGCATCTGAGAAATGCACATATGTTGGAAATACAAAAACTACAAAAAAAGATGAAACAACCATTATATTCAGATTCAAGTGTCATCTAGAATCTTTATACATTGTAAAAACAAGGCACAAGAATATATTGGCTAGTCTTTTTTTAATGGCCACTGTTTTCCTTTATGAAGCCCTGCATGTGGCGACCCTTAAACCATATATCGAGGAGATTCTCAAATAGTATAATACTAAAATTCGAAAGTATTCTCAAAGTAAAATGAACCAAATGTTCTCATCGCTTGTGTATGTGGGTGATATTTTCTCGAGGCTCACTGGTGGTTGGACTAAAGAAGAACCCGTGGTGTTAGAGCTAACAGTACTAGGTAATTTCCTGTGCATTTGCTGTTCAGCGTTTGAGGTCAAGCGATTTCCTTTTTGGTATGTCTCACTTGATGTTCCTCAAACTGAAGTGACAAACTTCGCACAGTTCCTTGCTAAGACATCTTCGATCATGTCATACATGTTCAACTGCCATTTTACATGATGGTAAGTACCTAGAATTTTGATCTTACAAGGCGAAACTATGATATCTTTCATCAGCGTATTGATATATGTCAGTTTGTTTTCTCGGTTATGGTGTAGACATGAGTTTACTTGGCAATAAACATTTTACATATATTCATATCTGGGTTTTCACATGCACTGTTATGTGAAAATAACCAACACGTAATTTAATGCTACTAACAATACAGCTTTAGCCAAATCAGCTTTCACTAGAACCCATGTGATTGTCATTGCATAACAGCAACGTTCCCTAAACCATTATATTAGTACTGACCACGACTAAAGGCTGCTTTTACATGTAAAGGCTTAAACACCTGTGTCGATGTTTACATTTCATTGGTGTATTTTACCATGCTGTGTGTTGAGTTTTGCTGTGGCAGCATTATTTTCCAAGATGCATTTCTTTTTCTCAATCAAGATTTCTGCGACCCCTCCTTGTCCTAAATAGCATCTTATTCATCTGTTTAAGAAGTTATTGTTGAACTAAAACCTAACTGACTTTTTATGGTTGGACAGTCACGTGATAAATAGAACAAACAGAGAGCTGACCAGGTTTAATCAAAGTTCACATTTGTGAGCACTACAACATATAATCTGGACAACAGGGAAGCTCTCGCTGCCATGAAATTTGGTAAGATTTAGTTTTAACTCTAACCATTATTTTACATAAAGGCAGTTCTCAGTATGGTAATGCTGGTTTTCAGAACTCTAGCAAAGATCTATGTGAGTAAATGATTACTGGGTGGTGATAAGTGTGCTTTAGTTCTAGTGGGGCACAGGTGCTTTAGTGCTTTAGTGCTAGTGGGGCAACATGCACTTGATCCTAAATCCATATACATTTAGTTATCTATACAAACACCAAAGACACCAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGAAAGAGCAAATCGGCTGTTAAGGTTTCCGTGTTTTATCTGTTTGCCTAAGAGTGACAGCTTATTATAGTGTTTTGGGAATATCGCAAAGAGTCTTCAGACAAAATCTATACTCTCTTTTTGAACGTCAGATTAATTAAGGTATATTGTCTTTTTTTAGGGTGAGTATCAGTTGTAAACAACAATGGAGAGAAGACAGCGTGAGGAGACAGTAGAGGGCTCCAGATCGCAACAGTCAACATTAACAGGAATCCTGGCACTGAAGAACTTCACTATACCCAGGAAGAAACGGACCTCTGGAGAAGTCCTACTGGAACATTGTTCAGAAGACAGCCGCGATTACAGTCTCATTCAGACAAAACTGAGAGATTCCAACCTAGACACAAGAAAGGACCGAGCAAACGCATGGATCTGGAGAGATGTTTGTTTAGTGCACAATGAAGAACTCCTTAAAAAGTTCTCTGAAAAAAGGGCAGAGATGCGTGCTAAAGGAAGACACGGGAGAGAAATGGAGGAAAGTTTCTGTTTTTTAGTTGCATCAGATCAAATGACGGCCCAGATTTATCAGCATGGTCTGCGGGTTGGCAACACAGTCCAGCATGCCTTGGGAAAGCCATCACATGGTGTATATCTGTTTAGGCATGTCGATGTGGCATTAAAGTCAACTACCAGCATATTAAGTGCAAACAAAATGCTAATTTTCAAGGTTCTTTATGGAAAGGTGAAAAAAATTGCTCCAAGCTTGGACTGGAACAAGACGCAGGATCCCACAGTGAGCTTTGACTGTCACATGTGTAAAGATGCAGTGTCCCATCGAGACACTCTTCATCAGCAAGTACTGGGCTCTGCTCGCTACCTATTGGCCAAGTGCAGGGCCTGTACTGTGGCAGAGAGAAGAAGAAAAGGAAACACAGCCACCATTACATTCAAACATTTTGGCACACCGGGCTGCTTAGAGACGGATTATACCCCTCAGAATCCAGGAGTAGAAGCTCCATTTCAAAAGACTGATATGCAAAACACTCGGTCACTCGAGCCAAAACAGCACTGGACTCTTGCCAGTGAGGACTCTGTATCTTCCAGCAGTTCAGTACCAGTTACGGATCACACTGCTCTCTCCCAAAGCTTGCTGGGAAAGAAAGCATTCACACATCGAAGAAATGACAGTAAATGGGACAAAACACCTCAAAGTCCATTGGACAAAATTTCCACCTTAGTGTATTCTTCACGCTTTGTTAGGGATCCACGTCTGTCTAGACAAGAAGCAAACCAACAGACCAACTGCTCAGAGGCCGAGGCAGTGTACACTGGCTCAGCATGTGATAATAAAACAATCCAACTAGCCTATCAAAACCAACAGGACAATTATGGGTTTGCTGGAAATAAGTGTGATTCAAAAGAGCCATCAAACATGGACAAGAAGGAAGCTCAAAGAGATAAGGGTGCTTGTTCCCTAAAATCCTCAATGAATGATGAATGTGTGCCTAGCCCAGCATTGCCCTCAATGAAGTTATTCAAAATGAAGTTCCAGAAATATGCTGGCTACTTTAGAATGAATGAGGAAGAGAGACAACAAAAAATCTGGTCACAAGAAAACTTGTCACTAGAACAAAAGCAAGATTTAGCTAACCGTATACTTTTCTATGAGGTTTTTTATGAGAAGTATAAAAAGGGATTGCTCTTTCAAAAAATCTATGAGACAAAGGAGACCTCCAGTCTGTCTCAAAGAGAGCCCAAAGAAAATCATGTTTTACAGACAAAAGACAACCCATACAAACAGAATCCATCTAGTTTGTGCCAAGCACAACGGCATGATGCTGCAAGTTTGTCAGATAACAATGATTTTGTTAACAGGGATAAATGGAGCATAACACATATTCATGAGAACAAACATCCAGATCATCCAGAACCCAGTGCAGTAATGTTGACAGAAAAGGTACAGGATCACCTACAGGAGGATGTGGGTCTGATTCAGTCTTCAGATAAACTTTCAGAGCAATCATTGGTGCTGGGTTCATTGAATCTTAACCTCACAGATGAAAAAGCTGATACACGAAGTGTTCAGTTTGATCTCAAGCACCCGAGTCCTTCAACTTGTCCCTCTAATGAAGCTAAGCTTAATCACAGCACAGAATGTGAGTGTGAGCTCTCCAGAAGTGCAGGAGAGGACATGCAGGAGAATGAATCTACTCTAGGTGTTAACTTGGTTGAAAGGCCCAGCACTGAATCGTCCCTTATGTATGCAAACAACATAATCGTCATGGATATTGCAAGCTGTGTCGAAGTCTCTAGCTGCGGGACATCAGACAACTGTAATCTCAGCCCTGCCATGGCAGAAACGCAAAAGCAGAATGGGCAAAGTTGCAGCAGTGTTCAAGGGATGGATTCCTTTAGACAGGTAAAATACTGTGAAATACCTCCAGAGCCTGAAATGGAAACAGTACAGCTGGACTACAGCCCTCACAGGGAATTGTACAAAAGACTTCAACTTGATCAACTATTGCCAAGCAAAAATCAAAAGCATGTTTTATCCTTAAGGGCTTACCTTACACCCAGAGTTATGGGCAGACCCACAGACACCATTTCCAAGCCAAAAAATGAAAGCAAAGATCACAACCAAGCCAAAACATACCTACACACGAGAATCTCAGAAGATCTCCATCTCAGAGTTACTCTAAAAGCCAACAAAACGTCTGCCCATATAAGAGAAATGCTTTCTCTTTCTGAACGATTTTCAACAATCAAAGGCCTTCAAAAGAAATTGAGAGGAAGAAACAACAAAGTGATTCAAACCCCAGGGACCCAAATGTGCAGCAGTGAAGGACACAAAGAAACTGCAACCAGTAATGCCGAACTAATACAGCTACTAGCTCGGAGGTTCACTAAATCTAAAATATATGTGAAAAGCAAGAGCTTGAGCAGACCAGGCAGTAAGAAGGCATGTCTCAAAAAACAGCACACAGTTCTATCACTAGGTCACTCTCTAAAGAGAAGCAAATATGTCAAGAAGACACGTTTTTGGAAAGCAAAGAAGAATCTTAGCAGAAAAATTGTGTCAGCTAAGAGTGCCCATGAAACAGTAAACAGCACGGCAACATCAGACTCTACAAACATTCCGTCACATACATCTGAAAAAGATCAAGACCCAGACTCTATTTTAAGAGTAATTTCTCAAACATCTGATGCTGAGGATGACAGACAGTGGCTACACATTGAGAGTTGTCAGGAAGCTAATGCTTTTAAAGGTATACTCCAAGATCAGTGTTGTCCAACCATGTCTGTTATCAGCAAAGATCTGACACCATCCATAGGTTTCAACACTATTCCTGAGACCAAAGAGGAACCAATAAATCATACAGAAGCATGTTCAGAAGATCTCTGTAAAAGTAACTCAGCCTACACTCAGAAGGCATCAAAAGATTTAACTTCACACCTAATTTCAGTAATGGTGGATGAAGAAGTGAAGACAACTAAAAACATTCCAAATCAAAAGGAAACATCCTTGATGACAAGCACTAGCAAAGATTATGGGAGTATTACAGAGCGCAAGGAGGAGAACATGTTGCTGAAAGTGACATCAGACACTAGATTGAATCCATTAAGCAACGAGCATTTCACTATGAAAATATCAGTAGATGACAATGTAGATGCTTCTAAGAGCTTGAGTATACATGATTATAAGGCATCAAAAACACACAGTGATGTGACCGTAAGCAACACAAACAACAGTCATACCACTAAATTCACAGAAACCAAAGTGATGGATACTATCAATAATACAGCTGAGACAGACACTATCAAATGTGAGCAAAATGCAAGCGTGAAAAGTTCTCTAAATGTACAAGCAAGAGAACGCATGCCAGCAAATATCCCAAATATGAATCACCCATGTGTCAAAATTTTTACCAACACATCTAATGGCAGCAGTGTGTGGAGTACTGATACAAAGGTGTTGGAAGAGGCAACATCAGATTCAAAGTGTGGTCTAGAGGCTTTGAAATGTGCATCAAATAATGTTGTAGATCTTACTGTTGATGATCCAGCTTTGAGTGGCCAATGTGAGATTTCTTCAGAGCACGTAAAGAGCAGCAACACCAATTTGTTTGGTTCTACCAAATCATCAAGTACTTACATAATCAAAGACAAATGTGATTTATCAAGGCCAGAGCAAAACAAAAAAGATGATGCGAACTCACCAGAAACCCAGCTTATTTCTAAACTAAGAGATTATTTGACCAAATTTGAGTCCACTGTCAAGAAACAAGAAACAGTAAATGAAGATCTGAAAGAAAGACCAGTGGTGTGGATAACACTTGACAGCACGGCACATAAACAGCAGTTGTTTGAAAAAGGCCAGTACTGTATGGTGAATCTTCCCTGCCTGTTGCCTCCTGGGAGTGACGCAGTTACAAAAGACAATTCCAGTGAATGCACCAAAACCTCTGTTCAAACCAGGAAGGTTCCTCAAAGTGAACATGCTCAAACTGGAACTGATGTTTGCCTGCTAGTACCTGTTGAATCTAAGAGAGGCAGACGATCTTCTCAAACCAAACGCACCAGAAGATCAAGAAGGAGCAAAGTCACTAGTGTTAGTCCTGACAGTACCAGTGCATTAGACACCGTCAAAGATAATACGAGTCCTCATCCCTTGGTCCAGGTGAACGACCTGAATATTGGTTCCCCAGAAATCTCCATTAATAACACCTGCAATGCCCAGTTACAGATGCAAAGAAATAACACAACTGGCCAGCAAAATGCCTCAGCAAATTTGGATAGTTTATGTGAACGAAAGAGTCAAGAGAATCAGTCTTCGAACGCGATCATAGAAATCATTGATGATGGCAATGTGAGCAGTACATTCGCTGGCAATGAGTACAGCATCAGTGACATTTCAAACATGCTTAAAATGGCTGATGAAACAACCTTGTTAACCGAACTTGGATCTTTGCAGTCTAAATGCAAAAACATGTTGCAGCATTTTGTCTCTAGTTTTGAACGAGATCAGAAAGAGCCATTCAACCAGTCTTTCGTTTCAAGGTGTCTCATCTTAGAACAATATTTGGAACATCCACCTGCACAAGTAGACCTGAAGTATGAAGCTGTGAATTCTTACTTGGAGTTGCAGATGATGATGGAAGCTTGGCAGTTTGTAGAAAACAAAATGAACTTCATGAGAGGTAAACCTACTTTTAGGAGTTTGCTTTGGTATGATCCTTCTCTTTACGGAGAACTCTACAAGGGGGAGGTTGGCTTTCAGCAGCAGTCATCGTTGTTTGCTTCTTTTCAAAAGATCTTGGCACAAGAGGGCTACAGCAAACTGCAGGAATACTACAGTGCAGTGTCCTCCTTGCACCAACAGCTCCATGCGGCCCCTGATGCATCTTACTACATGTATCTGAAGAGCAAGCGTGAACTCCTCGAGGCTGAGGCTGCTCTCAGAAATCCCCACGATATTAAAAGCTTCTTTTTATCTGTACCAATTACTGCGATGATCAATTTTGGAGACAATTTGGAAAGACTGGAAAAGGTCCACAAAGTTATAATGACTTTTGTGGAAACACCATCAGATCAGTTGCCAGGGACATTTGATGTTGGAAAAGCAGAGCATCTGTCCATAGCATGCAGATACCTCCAAGAAAAAGCACTTTTCTTGAAATCATGCAAAGAAGTGATTTGCAAAATATCATGGTTTGGAATCGAGCACCTTCTATATGATGCCTCTAAGGTTCTTGTGTGGAAAGACATGGGTCATGGTGCACCAAGTGAGGTTCTCAAGACATATAAGAATTCAAACCCGCAGATTATTTTTGGGGTGACAGAGTCAGGTGTTGCTCTCGTAAACAAAGTGGAACAGCCTCCTCCGTCCATGGATGGAGCAGAGACCAAACAAAAGAGTAATGCTGCACGGAAACGCAAAAGTTTACAGTTGTGGATGTCCTCTCAACCCCGTGTTGCACAGAGTATAAAGGCTGACAAGGAGGTGGCTTACAACATGGCTAAAAGGAGGGCAACTCATCCACCTGTAACACAATATAACATGAATAATAAAGGTGTGAACCCCCCTTTCCAAACAACTCCTGCAAGCCATGTTGAGATCCCAAGGCCATACTACGCTCTTCCTCACAGAGTGGATCCGGGCCATTGGGGAATGGTTGGAAGCACCGCTGCAGACTGGAACGTGTCTTCACCTTCCACGTCTCATGCACACCCTGAAATAAATTCGAATCTTCTGTCTAAAAGACGAGTGACTTTATCACACTCTGATGAGAGGAGATCTTTAGCAGACGTACAAAGACCTCAATGGCCTTCAGTCTCGGCTCCCCAAGCAACTTTACGAGGAGATTCTTGTGCTACACATCCAGCGTTTGATAGTGTTAAATATCGACAAACTAACACTGCAGCACATCGTCCTGTGCTCTCACAAGAACAAGTAAACCAGTTCAGTTTAGCCATGACACAACCTTATAATTTACCAAATTGTCCTTTGAATGCAAATTTGGTACATCCTCCTCTCTCAGTTCAGGCTTTGACACATGTCCCTATGCCCAGCACGATTACAGCTATTCATTACCCCTATTTCCTTCTGAATGGACAAACATACACCACAGGCTCCACTTCAGCCATTCACCCTGATACTAGATATTATCCCAACACCATGGGCTAATGAACTACAAGCTACGAGTGAATCACATAGATAGCTAATGTATTTTTGTCTATGACAATTTTATTTACGGGGAAATAACATCAAAGAACTGGTTTTACATCTTATAACTAAAATCACTGATACATACATATGCACTTGGTACTTTTAAGCAAATGTACTTTAATGTGACTTTAATGTATATATTATATAACATACATTTTCAGGTAAAACCATCCATTTCTGTATATAACAGTGTTTTGTACAGAGTTCAGTTACTTTATTGTGGTATTTATTGCAATTCAACATTTATGTGAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_00862451_00870277.mRNA True 8930 mRNA 0.41 8 862153 872429

Neighbor

gene id symbol gene type direction distance location
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding downstream 786 852946 ~ 861367 (-)
CI01000304_00843412_00844705 HINT1 coding downstream 17448 843295 ~ 844705 (-)
CI01000304_00748608_00750261 NA coding downstream 110621 748315 ~ 751532 (-)
CI01000304_00682765_00692613 NA coding downstream 169497 682509 ~ 692656 (-)
CI01000304_00670372_00671143 NA coding downstream 191010 669276 ~ 671143 (-)
CI01000304_00877256_00878179 PURG coding upstream 3705 876134 ~ 878179 (-)
CI01000304_01030191_01033191 FUT10 coding upstream 156743 1029172 ~ 1033191 (-)
CI01000304_01054942_01133130 NA coding upstream 182513 1054942 ~ 1133130 (-)
CI01000304_01186035_01200177 SLC38A9 coding upstream 313432 1185861 ~ 1200808 (-)
CI01000304_01216763_01232729 DDX4, VAS coding upstream 344287 1216716 ~ 1232729 (-)
G418563 NA non-coding downstream 22796 838856 ~ 839357 (-)
G418558 NA non-coding downstream 27991 833946 ~ 834162 (-)
G418556 NA non-coding downstream 33310 828514 ~ 828843 (-)
G418499 NA non-coding downstream 125081 736869 ~ 737072 (-)
G418423 NA non-coding downstream 134849 727009 ~ 727304 (-)
G418530 NA non-coding upstream 243 872672 ~ 875306 (-)
G418567 NA non-coding upstream 13377 885806 ~ 889909 (-)
G418573 NA non-coding upstream 30413 902842 ~ 905854 (-)
G418576 NA non-coding upstream 37211 909640 ~ 916578 (-)
G418584 NA non-coding upstream 54075 926504 ~ 926783 (-)
G419353 NA other upstream 1356955 2229384 ~ 2236106 (-)
G419354 NA other upstream 1390073 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3391316 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 3789387 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5605022 6480743 ~ 6483986 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_001891 tex15 coding NC_007121.7 CM002894.2 7585928 ~ 7588878 (+)