CI01000304_01030191_01033191 (FUT10)


Basic Information

Item Value
gene id CI01000304_01030191_01033191
gene name FUT10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1029172 ~ 1033191 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_01030191_01033191.mRNA
GTTATTGAGCAGTTAGGACGGTTTGAGCAGGCTGCACACAGCCAGCAGTTCACACACATACAAGCCGCCCGGGCGATAGAGGTCCCGTACCCTGTCATTGTGTGGTGGTCTCCTCTGACCGGAGAACTGGGACGTCTCGGAGAGTGTGGCCGTAACAGGTGTTTCTTTACTGTTAACAAGTCCTATCATTCCCATCCACAGACAAAAGCTTTTCTTTTCTATGGTACCGATTTCAGCATTGAGAGTCTCCCTCTTCCTAGACATGAGCAGCACCAGTGGGCACTGTTTCATGAGGAGTCACCCAAGAATAACTACAAGCTTTTTCATGAGCCACTCATTACCTTGTTCAACCACACAGCAAGCTTCAGCCGGCACGCTCATCTGCCTCTCACCACGCAGCACCTGGAGGGCATCAACGCTCTCACCGCACAAACACACCTGCTTTCTCTGGCCTACAAAAACCGCCTGAGGAAAACTCTGGCGCCTGTGGTGTATGTCCAGTCAGACTGCGACCCACCATCTGATAGAGATGTTTACATTCAAGAGCTGATGCAGCACATTCAAGTGGACTCGTACGGACAGTGTCTTCATAATAAAGACCTGCCTCCTCACCTGAGAGACTCTACTGCAATGGACGATCAGAATTTCTACCAGATCCTCACCCAGTACAAGTTCATCCTGGCCTTTGAGAATGCCATCTGTGATGACTATATCACTGAGAAGCTGTGGAGGGCGCTCAAGCTAGGTGTTGTGCCAGTGTACTACGGAGCACCTAACGTACACATGTGGTTGCCAGATAGCAGGAGTGCGATCGTGGTCGATCCCAATGAGCCGCCGAAGAAGCTCGCTCAGTATATAAAGATGCTGGACAAGAATGACTGGGAATATCTGAAATATCTGGAGTGGAAGCTCAAGCGTGAAATCTCGAATGTGAATCTGGTGACCGCACTGAAGGAACGTCAGTGGGGTGTTCAGGATATCGGTCAAGATAACTTCATTGACGTCTTTGAGTGCATGGTGTGCAACAGGGTCTGGGAGAATATCCACAGGCAGGAAAAGAAGCTGCCTTCTAAAGTTTGGCGAGCTGAAGAAAGCCACCTCAAGTGCCCATCTCCAAAACTGTTTGACTTTGCCGTGAGCTCAAGCTCATCTCTTCGGCAGATGTGGAGAGCCAGTTATGAACAATCCAAGAAAGAAGCCAGAGCGCTCGGTCTGATGCTTCGCAGGAACAGAAACTTCACTGTCACGCAGTTCTGGAGAGAAGTGTTTACAGACCGAGAGGAAACAGATAACTGAACTGTAGTCATCATGTTTATGTTGATGGTAGACCTGTGGACTGCATTTCAGGAGGAGAAAAAACTTCAAGGTAATGTGTAATTCATAGGGCTATTTCATGTTATGTGGAAAGTTATGTCATTCATAACATTATATTTGTCATACATAGTTTGACATTTTGTCTCAAACACTCAGTTCAATGCTCAGATAACATATGCACTAACCATTTGTTATTTTATTACTCCTTTACAGTTACACTTTATACTAATGTCCTATTAGTTAATGTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCGCCCTCATGTCGTTCCACACCCGTAAGACCTTTGTTCATCTTCAGAACACAAATTAAGATGTTTTTGATAAAATCCGATGGCTCAGTGAGGCCTCCATTGCCAGCAAGATATTAACACTTTCAGATGCCCAGAAAGCTACTAAAGACGTATTTAAAACAGTTCATGTGACTAAAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTCTGCCACAAAACCAAATTAGCGACTTTATTCAACATTATCTAGTGATGGGCGATTTCAAAACTGCTTCATGAAGCTTCGAAGTTTTACGAATCTTTTGTTTCGAATCAGTGGTTCGGAGCATGAATCAAACTGACGGAGCATGAATCAAAGGCACGCAAACTATTGAAATTTCGAAACACTTATGACGTAGCGAAGCCTCGTTTACTATAATCACATGACTTTCACACTCCGAACCACTGATTTGAAACAAAAGATTTGTAAAGCTTTGAAGCTTCATGAAGCAGTATTTTGAAATCCCCTATCACTAGATATTGTTAAATAAAGTCGTTATTTTGTTTTTTTTTGTGATTTATGCAAGTCATTTATATATATATTTTTTGTGTGATTTATGCAAGTCATTTATAATTATTAAAGGAGGAAATTAGTTTGTTGAATTTAGTTTTTTAACCATAAGGGACAATCACTTCACACAGTGACACTGTAATAAA

Function

symbol description
fut10 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane and Golgi membrane. Predicted to be integral component of membrane. Orthologous to human FUT10 (fucosyltransferase 10).

GO:

id name namespace
GO:0008921 lipopolysaccharide-1,6-galactosyltransferase activity molecular_function

KEGG:

id description
K09669 FUT10; alpha-1,3-fucosyltransferase 10

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_01030191_01033191.mRNA True 2315 mRNA 0.43 3 1029172 1033191

Neighbor

gene id symbol gene type direction distance location
CI01000304_00877256_00878179 PURG coding downstream 150993 876134 ~ 878179 (-)
CI01000304_00862451_00870277 NA coding downstream 156743 862153 ~ 872429 (-)
CI01000304_00852998_00861119 PPP2CA, PPP2CB, CDKL3 coding downstream 167805 852946 ~ 861367 (-)
CI01000304_00843412_00844705 HINT1 coding downstream 184467 843295 ~ 844705 (-)
CI01000304_00748608_00750261 NA coding downstream 277640 748315 ~ 751532 (-)
CI01000304_01054942_01133130 NA coding upstream 21751 1054942 ~ 1133130 (-)
CI01000304_01186035_01200177 SLC38A9 coding upstream 152670 1185861 ~ 1200808 (-)
CI01000304_01216763_01232729 DDX4, VAS coding upstream 183525 1216716 ~ 1232729 (-)
CI01000304_01365055_01365447 NA coding upstream 331610 1364801 ~ 1365559 (-)
CI01000304_01403041_01410830 APH1A coding upstream 369701 1402892 ~ 1410830 (-)
G418629 NA non-coding downstream 8231 1020657 ~ 1020941 (-)
G418590 NA non-coding downstream 9125 963739 ~ 1020047 (-)
G418628 NA non-coding downstream 27490 1001280 ~ 1001682 (-)
G418616 NA non-coding downstream 45536 982262 ~ 983636 (-)
G418592 NA non-coding downstream 60595 966426 ~ 968577 (-)
G418593 NA non-coding upstream 139007 1172198 ~ 1172813 (-)
G418595 NA non-coding upstream 139990 1173181 ~ 1175223 (-)
G418647 NA non-coding upstream 142576 1175767 ~ 1176008 (-)
G418594 NA non-coding upstream 144590 1177781 ~ 1178694 (-)
G418589 NA non-coding upstream 149684 1182875 ~ 1184560 (-)
G419353 NA other upstream 1196193 2229384 ~ 2236106 (-)
G419354 NA other upstream 1229311 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 3230554 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 3628625 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 5444260 6480743 ~ 6483986 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location