CI01000304_01718700_01722248


Basic Information

Item Value
gene id CI01000304_01718700_01722248
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1718328 ~ 1722276 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_01718700_01722248.mRNA
GTTTAAATGACAAGTCGAAGATTTAGATTTATTTATCAGACCCACTATCTCTGAAGTAGTTGGCAGTGTAAAGTTAGAGTAAACAGAGTGGGGAGGTGCGTGAGAGAAAGTACCAGTAAGTAATTGCTGATGTACATTTCTTACTCAAAAAAAGTCATAAAGCGATCACATAAGTCAGTGGAATACATATCAGATGGCAAAGAATCAGGAGGTCGCAGAATATTGTTTACCACAGAGAAAAGAGATCTGGAGTTCCCATTGCTGACTCCAATTATGTTGGAGTAATAATCAGATTTAGCTTTGGACAGTGTATTTTTGTAGTTTTGAATATGTTCAGCATACATTTCTTTATGAACAGTAAGGCCAGACCTGATGTGCAACCGCTCTAACCTACGGCCTTTAGTTTTAAGTTCACACAGTTCAGGGGTAAACCAGGGAGCTGAATGTACAAATGAAACAGTTCGAGTTTTCACAGACCCTCCGTTGAAACCGGAGAATCTGACGTGCATTGCTATGCAGGAGGGCAAGGATATTTCCTCTGACTTAAAATGCAGTTGGGAATTCGAATCACGGGATCCGCTGCTCGACACCACTTACACCCTTTATGCTACAATATGTCTAGATAACTCAAAGTATTACGACATATGTAATCAGCGTCTTGCAAAAACCTGCACCGTCAACCTGAGCACTTTTCCATTTGCCATGGATGTGAAAGTGTGGGTTGAAGTGAAGAACTTGCTGGGGTCAGTGCGGTCAGACGAACTTCTATGCAATGATGCTTTGAATTTTGTGAAACCCAATCCACCATTGGATGTCCGAGTTCTCTCTGAAGTTAACTCCACATCTCTCGTGGTTACTTGGAAACATCCCACTGACATTTTTAAACTCTCGTATGTCATCAGATACTGCCAAGTAGACTCTGATGTTTGGACCGAGGTGCCCGAGAGCTTCACCCAAGCGCGCACAGAGTCGTTTAGACTGCAGTCGCTGGAGCCTTACACTGAATATGTGGTACAGATGAGATGCATTCGAGAACACCATCAAAGCCACTGGAGTGATTGGAGCGCTAATGCTACAGTTCGCACTGCAGAAGCCAGTATGACCTGTATTATTTCTAAAATGATTGAATTGCTCTGAAATAGTTGTTTGTATTTGTACAGCCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_01718700_01722248.mRNA True 1165 mRNA 0.42 5 1718328 1722276

Neighbor

gene id symbol gene type direction distance location
CI01000304_01681164_01706159 ANKRD55 coding upstream 11931 1681164 ~ 1706397 (+)
CI01000304_01392985_01399147 CA9 coding upstream 319175 1392985 ~ 1399153 (+)
CI01000304_01375020_01379551 NA coding upstream 338512 1374871 ~ 1379816 (+)
CI01000304_01369056_01372878 DCP2 coding upstream 345356 1368596 ~ 1372972 (+)
CI01000304_01366207_01367994 DCP2 coding upstream 350326 1366120 ~ 1368002 (+)
CI01000304_01829156_01835147 ST8SIA4 coding downstream 106880 1829156 ~ 1835165 (+)
CI01000304_01877287_01890608 SYK coding downstream 153114 1875390 ~ 1890746 (+)
CI01000304_02136252_02167869 SEC31A coding downstream 413976 2136252 ~ 2168463 (+)
CI01000304_02206338_02219356 NA coding downstream 484062 2206338 ~ 2219642 (+)
CI01000304_02229520_02235812 HNRNPDL coding downstream 506863 2229139 ~ 2236204 (+)
G418798 NA non-coding upstream 679 1716527 ~ 1717649 (+)
G418751 NA non-coding upstream 148893 1569236 ~ 1569435 (+)
G418669 NA non-coding upstream 150071 1564905 ~ 1568257 (+)
G418671 NA non-coding upstream 157673 1521407 ~ 1560655 (+)
G418683 NA non-coding upstream 229308 1488555 ~ 1489020 (+)
G418790 NA non-coding downstream 48291 1770567 ~ 1809992 (+)
G418860 NA non-coding downstream 135891 1858167 ~ 1858452 (+)
G418861 NA non-coding downstream 137601 1859877 ~ 1860106 (+)
G418865 NA non-coding downstream 176880 1899156 ~ 1900776 (+)
G418872 NA non-coding downstream 186843 1909119 ~ 1909325 (+)
G418116 NA other upstream 843079 872670 ~ 875249 (+)
G418059 NA other upstream 1153877 558092 ~ 564451 (+)
G417987 NA other upstream 1490475 226703 ~ 227853 (+)
G418981 NA other downstream 370218 2092494 ~ 2093678 (+)
G420445 NA other downstream 2581060 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 3450947 5173426 ~ 5176791 (+)
G421162 NA other downstream 4518957 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5630373 7352621 ~ 7354396 (+)

Expression


Co-expression Network