CI01000304_01897341_01897684


Basic Information

Item Value
gene id CI01000304_01897341_01897684
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 1894422 ~ 1898210 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_01897341_01897684.mRNA
ATGTAAACATTTCTTTTAAACAACATTTCAACACTTTCTTCATTTAACATTTTTTATAACTTTATACAGTCTTTATAAAGTCACATTATGCAGAGCCAGTGCTTGCTTTGAACTTTTGTAATATCTAAGGATAAAGGATTGTTATCAAAAAGCTGTTTCTGAATGAATGTTTAATATTAAAAAAAAAGTTCACTAAATAATTTTTATTAAAATAGTCAAATAAAATTCATTGCCAGAAAACAAGACCTAATTGATTTATTTTAATATACTTTAGAACTACCATTTTTTTAAAGGGTCATGAACTGCTTTTTTATTTTATAATGTTCTATGAGATCTACTAATAATGTTAGCAAGATTTTTACGTCAAATAAATAAATAAATAAATAAATAAATAAAACAATTTAGGAGTAATATAGACTATGTTCTATCCTGTTTTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTTTTTTTTGCCTTGAATTTCGCCTTGTGCAGGTGGAAACACAGAAAGCCAACAGATGAGGCATGGGCTTCCGCTATATGCTAATGCACATAGTGGACTTTGTGGAGAAGCATGGCGAATGCCATGCAAATGTCAGTAAAAGTGGCCTGTTCAGGGTCAGCGGGTCAGTTAAACGCTGTCAGGAGCTGAGGAAAAGTTTCGATCAAGGAGGCTTTCCGAGGTTTGACAGTGGGGATATTTCTACTCTGGCCTCCTTATTAAAACTTTTCCTCAGGGAGTTACCCAGTGGTTCAGGATCCACACAGGACACAGCTGATGAAGGTGTTCGGGGGTAAGTGATGCTGGAGTGGTGATAAGTAATTCTTTTATCTCTCAGATTCAAAAGAGGGAGAAGTATATCTGGCAACAAGGAAGATCGAGCAGTCTTCCTGAGGAGCATAAACATCCAGTGCTACCTGATGTTCTTCTCCAGAGTGCTCAGGACCTCAGACTGGGCCGAAGGTTTACCTTCCAACAAGACAATGACCCTAAGCACACAGCTAAAATAACGAAGGAGTGGCTTCACAACAACTCCGTGACTGTTCTTGAATGGCCCAGCCAGAGCCCTGACTTAAACCCAATTGAGCATCTCTGGAGAGACCTAAAAATGGCTGTCCACCAACGTTTACCATCCAACCTGACAGAACTGGAGAGGATCTGCAAGGAGGAATGGCAGAGGATCCCCAAATCCAGGTGTGAAAAACTTGTTGCATCTTTCCCAAAAAGACTCATGGCTGTATTAGATCAAAAGGGTGCTTCTACTAAATACTGAGCAAAGAGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTACTAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAGGAAAAAAAATGAACTTAAATGATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATGAACTTAAATGATTTTAGCAAATGGCTGCAATATAACAAAGAGTGAAAAATTTAAGGGGGTCTGAATACTTTCCGTACCCACTGTATGTATTAGTACATGTATAAGTTATGTCATAAAAGGAATATGGGTGTCTGGTATTTTAATATTTTTAGTTGTACAGTATTTAGTAAGGTATTTAGGAAGACATTTTTATTTCTGTATGTTCATATTACTGTGCATCCAAGAAAATTGTCACACATTTTTTTTTTTTTTTTAAATGCTCATTTATTTCTTAAAGCATTACTGGACGTAATACTATTGTATTGTAGCCGTACATTTCCATTTGCTCAGCATCATTTATCAATATTATCAAACTGAGGAAGAGCGATATTCCAATGTGTCATGCCATGCTGTTCAGTTATCAAGCTTGTGCAAAGTCTGGAGCGACTGAATCAAGCTGACAAATCACAATGAATACAATGAATTCACATAGGACAAAAGAAACATGGAGAAAACAATCTTAAAAGATTACTGGTTGCATTTTAATTGCTTAGACTGTCACACAGGTAATGACATGCAAAATATGCTTACATTTATCTGATGGTGTGAAGTAAACACTATCCACAAATAGAATGAATGACAGCTTGTTTTAACACTTTAACATTTTTAAATTTTTAAACATAAACTCAAGGTTAAAAATTAGAATTTGGCAATTAGATAAAGACAGAAACTCAGTAAAGGCCCCAATATACTTCAAGCGAAATCGAAGAAGAACTGGTGTGACACCATTTTGAACAAAATCAGGCCAAAACAAAGTTCGAAGTATATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_01897341_01897684.mRNA False 2288 mRNA 0.34 2 1895852 1898210

Neighbor

gene id symbol gene type direction distance location
CI01000304_01862046_01862663 DIRAS2.L, DIRAS2 coding downstream 33189 1861714 ~ 1862663 (-)
CI01000304_01839482_01853648 NA coding downstream 42059 1839470 ~ 1853793 (-)
CI01000304_01764213_01809758 PAM coding downstream 86094 1763630 ~ 1809758 (-)
CI01000304_01573427_01639447 MAP3K1 coding downstream 256013 1572399 ~ 1639839 (-)
CI01000304_01560571_01565345 HMGCS1 coding downstream 327576 1560368 ~ 1568276 (-)
CI01000304_01937620_01968424 AUH coding upstream 39410 1937620 ~ 1968936 (-)
CI01000304_01970027_01971430 NFIL3 coding upstream 71817 1970027 ~ 1971430 (-)
CI01000304_01975851_01976768 NA coding upstream 77456 1975666 ~ 1977367 (-)
CI01000304_01977963_01994161 ROR2 coding upstream 79648 1977858 ~ 1994161 (-)
CI01000304_02041045_02041482 NA coding upstream 142720 2040930 ~ 2041497 (-)
G419324 NA non-coding downstream 135555 1759956 ~ 1760297 (-)
G419296 NA non-coding downstream 146888 1746792 ~ 1748964 (-)
G419285 NA non-coding downstream 251573 1644045 ~ 1644279 (-)
G419276 NA non-coding downstream 341447 1549416 ~ 1554405 (-)
CI01000304_01365055_01365447 NA non-coding downstream 530293 1364801 ~ 1365559 (-)
G419387 NA non-coding upstream 4431 1902641 ~ 1903444 (-)
G419402 NA non-coding upstream 169033 2067243 ~ 2067756 (-)
CI01000304_02131491_02133762 NA non-coding upstream 189914 2131300 ~ 2135561 (-)
G419370 NA non-coding upstream 197368 2095578 ~ 2097618 (-)
G419353 NA other upstream 331174 2229384 ~ 2236106 (-)
G419354 NA other upstream 364292 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 2365535 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 2763606 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 4579241 6480743 ~ 6483986 (-)

Expression


Co-expression Network