CI01000304_02061451_02063273


Basic Information

Item Value
gene id CI01000304_02061451_02063273
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 2061260 ~ 2063461 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_02061451_02063273.mRNA
AGCGGCGGTCGACGAACACCTTTCGATTGAACGGGATGAAACGCGTTATTGTTTTGCAAACGAACCATCAAAAACAGTTTAATTCACTTCACACTTGAGACCTTGGGAAAACGCGCTTTGTTCGCACGCACAAACTCAGTTATCACTTGTGGAGAGGTTTGATTCCAGAATCCAGCTGCACCAGAGGAATGTTTCCAGTAAGGATGTATATACTAAGGATTACAACTCAAACTCGTCTGCTGGTGATATCCATCTTCCTCGCAATTTTTACATATGCAGGGAGGAGTGTGACAGATGTTGAAATTTCCTGTTTTGAATTTGCGCTCTTTTGGCCATTTGGCTGGAGGTTTAAAGGGGGATGGGACATGCATGGTGTCTCCTACCAAGTTTATCACCCTGTGCTAAAGCTTTGTCACCAGCACTTGAGATTGTGGGCCTGGAGGTTCAGCCTCTTTTGGCTCACACTTTCAACCATCAAAAAGGTGTTGGAGATGTTCAGCAAGCCCATTGACATGGTAATTGATTCAGTTGCTAATAAGGGTGCCTGAACCCACAGACAACTGAATCAGCTTCAAACAATGTAGACTGAGAAGGGGGTATGTGTTTTTAAATAGTCAAGTTATTTTCAGATCTTAATGCCTCCTCCTTTGAGCTTAATGCCTGCTCCTTATAGCCATTTGCATGTTTACACTTTTGAGTCTTTGGATGTTAATGCTGAATGAATCTGTTAATCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_02061451_02063273.mRNA True 739 mRNA 0.42 3 2061260 2063461

Neighbor

gene id symbol gene type direction distance location
CI01000304_02041045_02041482 NA coding downstream 19763 2040930 ~ 2041497 (-)
CI01000304_01977963_01994161 ROR2 coding downstream 67099 1977858 ~ 1994161 (-)
CI01000304_01975851_01976768 NA coding downstream 83893 1975666 ~ 1977367 (-)
CI01000304_01970027_01971430 NFIL3 coding downstream 89830 1970027 ~ 1971430 (-)
CI01000304_01937620_01968424 AUH coding downstream 92324 1937620 ~ 1968936 (-)
CI01000304_02066780_02080386 SPTLC1 coding upstream 3090 2066551 ~ 2080386 (-)
CI01000304_02131491_02133762 NA coding upstream 67839 2131300 ~ 2135561 (-)
CI01000304_02184710_02202104 NA coding upstream 120942 2184403 ~ 2202409 (-)
CI01000304_02220391_02227729 ENOPH, ENOPH1 coding upstream 156424 2219885 ~ 2228318 (-)
CI01000304_02244094_02244588 NA coding upstream 180258 2240069 ~ 2244588 (-)
G419387 NA non-coding downstream 157816 1902641 ~ 1903444 (-)
CI01000304_01897341_01897684 NA non-coding downstream 164850 1894422 ~ 1898210 (-)
G419324 NA non-coding downstream 300963 1759956 ~ 1760297 (-)
G419296 NA non-coding downstream 312296 1746792 ~ 1748964 (-)
G419402 NA non-coding upstream 3782 2067243 ~ 2067756 (-)
G419370 NA non-coding upstream 32117 2095578 ~ 2097618 (-)
G419363 NA non-coding upstream 38996 2102457 ~ 2161900 (-)
G419353 NA non-coding upstream 168294 2229384 ~ 2236106 (-)
G419354 NA other upstream 199041 2262502 ~ 2266241 (-)
CI01000304_04263955_04264962 NA other upstream 2200284 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 2598355 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 4413990 6480743 ~ 6483986 (-)

Expression


Co-expression Network