CI01000304_02206338_02219356


Basic Information

Item Value
gene id CI01000304_02206338_02219356
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 2206338 ~ 2219642 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_02206338_02219356.mRNA
AGCAAAACCCCTTCACTAGCTCTCACATTGCCTACAACCGAATGCAAACGATGTCTGTCTTTGAGTCCTAATGAAATGAAGAGGACACGGGTTTTGTACGCGACAGAAGAGTGTGCTGTCTACAAGACTGAAACCTGTCGACACATCAGGCATTCTCGAAGAAATCTTGAGACTGGTATTTCATTGCTGTGGAGGATGAGAAAATCACCCCACTCAGTTCAGAGTACAAGCTTCATTCTTGGAGTGCTGAGATACCTGCAGTTGAAACCGAGGGTGCATAAACCCTGGCTTAACATTGGCAGTCTGGTGGCTTTGTCTCTCGCCTGCTTCGGTATGACTTTAGTTGGGAATTTCCAGCTGTCCAATGATGAGGAACTGCATAATATTGGCACCTCCATGACCTTTGGCCTAGGAACCCTTTTCTGCTGGGTCCAGTCTTTCATGACCCTAAAGGTCAACTTGAGGAATGAAGGCAAGCGAGCAGGAATCCCCCGCTTCCTGCTGTCCGGGGCTATAACAGATTTTGCCCTGATGGCTCAGCGGCTACACATGCATGCCGCCCGGGCCCAGTGGGCGCTGGTTATGTTCTTCCTGATGTACCTGGGCACATTTGCCATCGAGTTTCGCCACTACCATTTTGAGATTGTTTGTAGCGACGACCAGGACCCTCCACTTAGCCTGTCTGAAAGCTTCTCTGAGGTCTCAGAGTACCAGTCTGACCAGCTATAGTCTCACTTCCACAGTTTCCTTCCACCCTCGTACTTCCAGTGTTCGCCAGTTATCAGTCATGCATGTAAAATGAATGTAATCTCTCTAGAAAGACCTTTGGATGAGTTTGTTTTCTGAATAGTAGATAGGCTTTTGCAGAAGCAACAAATTCATGAAATGCACAACGATTTAATGTGATGTGTTCCATGTTTATGTATCAGATGAGTGAAGTAACAAGGACACTTTCAAGGAAAAGATCTGAATACAGGAACAGTTTTTTTGGCAAGATAATCCTTCAAAAACATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_02206338_02219356.mRNA True 1015 mRNA 0.46 6 2206338 2219642

Neighbor

gene id symbol gene type direction distance location
CI01000304_02136252_02167869 SEC31A coding upstream 37875 2136252 ~ 2168463 (+)
CI01000304_01877287_01890608 SYK coding upstream 315592 1875390 ~ 1890746 (+)
CI01000304_01829156_01835147 ST8SIA4 coding upstream 371173 1829156 ~ 1835165 (+)
CI01000304_01718700_01722248 NA coding upstream 484062 1718328 ~ 1722276 (+)
CI01000304_01681164_01706159 ANKRD55 coding upstream 499941 1681164 ~ 1706397 (+)
CI01000304_02229520_02235812 HNRNPDL coding downstream 9497 2229139 ~ 2236204 (+)
CI01000304_02236583_02240921 HNRNPD coding downstream 16725 2236367 ~ 2241608 (+)
CI01000304_02254859_02262580 MAT2AL, METK1 coding downstream 34252 2253894 ~ 2264078 (+)
CI01000304_02267341_02290220 SNX30, SNX30.S coding downstream 47699 2267341 ~ 2290283 (+)
CI01000304_02558750_02584199 NA coding downstream 339108 2558750 ~ 2585195 (+)
G419001 NA non-coding upstream 18919 2186731 ~ 2187419 (+)
G418998 NA non-coding upstream 21545 2180561 ~ 2184793 (+)
G418980 NA non-coding upstream 119810 2086310 ~ 2086528 (+)
G418909 NA non-coding upstream 139475 2059352 ~ 2066863 (+)
G418886 NA non-coding upstream 279778 1926222 ~ 1926560 (+)
G419006 NA non-coding downstream 8999 2228641 ~ 2228848 (+)
G419019 NA non-coding downstream 46124 2265766 ~ 2327739 (+)
G419081 NA non-coding downstream 203731 2423373 ~ 2423578 (+)
G419082 NA non-coding downstream 204335 2423977 ~ 2424792 (+)
G418981 NA other upstream 112660 2092494 ~ 2093678 (+)
G418116 NA other upstream 1331089 872670 ~ 875249 (+)
G418059 NA other upstream 1641887 558092 ~ 564451 (+)
G417987 NA other upstream 1978485 226703 ~ 227853 (+)
G420445 NA other downstream 2083694 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 2953581 5173426 ~ 5176791 (+)
G421162 NA other downstream 4021591 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 5133007 7352621 ~ 7354396 (+)
G421435 NA other downstream 5264499 7484141 ~ 7484688 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location