CI01000304_02900497_02900924


Basic Information

Item Value
gene id CI01000304_02900497_02900924
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 2899799 ~ 2902102 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_02900497_02900924.mRNA
ATAAAAAATGAGAGATATGCTTAATATGACGATCTGCTGTATGCCAATGGTCCATGATGTTGTACATGTATTGACTGCATCTATAATATTTATTTCCCTGTAAATCATTTATTTTAAGTGGACTTAAATAAATTGTTAAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAAAATGTTAAAATTATCTTTAAAATCATATTATATACAGTAAAGCAACGATGGTAGTATGTTAAATAATGTTATTCTGGCAGTTTGTTTGCAAATCACAAGAGAGAGTTTTATCAACTTACAACCTGCATCACATTTTAATTGTATAGTGTCAGCCTCTTTTATCGTTCATGACTGTTTCTGTCTCTTGCATTTAGAATTATATGGTTTATTATTATTACTCCTATTATATTTCTTCTCAGTACTAAGTTAGTGACAAACAAGGTTTAATCCTACTGAAACACTTGAGGAATAAGCCTATTAGTCCAGGTGATATGTGCAAAATTTTAGGTGAAATGTTCACTTTTTCATAAAAGCATGAAATTTGGTACACTTGAACAGTTTTGGACCCTGAACATTTTCAGAAATGGAGCCATCACAAAAACGACTTGTGGTCGCCATGGCAACCATTTTACTTTTCCGCCATAACCAAATGGTGTATTTTGTATCATATCTCCTGAATCAAACATGATAACAGAGAAAAGGTGATGTCTACCCCTATGTTTTGATGGTCAAGGGTTGCAATGATACCATTTAAAACATTATAAACTGTTCAGGTGAATGGTTAATGGTGAATTCAGTGATGTGAGAAGGAAATCACAGTATCTGAGAACCTAGGCTAGACTTTGTGTAACATGCAAAAAGCTTAATCGTTTTGTTCATTAACCCTGACAATACACTGTACACAATGACTGTAAAGAGTAGAATCTTCAATATGACCCTAGCAACATAGCTTAAAATGAATGTCAAAGATTTACTTCAAAAAAATCTATTTCAGAAACACGTTTGTTTGATTGCTTTGTTGTTGTTGTCGTTTTCTTCACAGTCTCCTCCACATTGACACAGAGCTGTGCACTTTAAGGAAGCTTTTTTTACATTTGCAGTGCCGACCAGCAGCCTTTCTAGCAGCCACAGCTTAAGAGTTCAAGGATGGTCTGGCTTGGCTGTGGAAGAGTTGACCACAATGGTCTCCAAATGCTTGGGTCCAACCAACCCCAGTCTGTTGCCACCTCAAGTGCTTGTACTCAATAGTGTTCTCCTTGGTATCCCATGCTATCTTCTTGCCCCTGGTTTCAAATGCAGATACTGTGTCACAGCCAGTGAAGGCCTAGAACACAGGAAGGGCCTTGGATTTGTAACTGCCAGTCTCCACACCCTGATGACATGGGCCTACAACCAGTACACTGAATCAAGACTATCTGCTAATCTGCTTGTCACCATTGACAACTGGTGTACCATGAAACAGCAAGAAAGTCTTCAGTTTTTGTTTTGGCACACTGGCCTGCACAAGAATCAAATCAGATTGCCTCTTGCGTACATGAAGAGGTAGACACAAGAATGCTACACCATGCGGCAGATTCTGCAAGAAAAGGATTTAAAAAGATCACCCTGTGCACCGTGGACACAGATGTCATGGTCCTAGCCATTACACATGTGTCGGAGCTGGACATTGAGGAGATGTGGGTGGAATTCAGGACTGGCAAGAACTTCAGATACATACCTGCCCATGAGACTGCCAAGTCTCTGGGTCCTGACAAATTCAAGGCCCTTCCTGTGTTCCATGCCTTCACTCCCAGCCCATATCTGGTATATGTGGATTACACGTGGACCAGATGTGGGCCGGATCTGGGCCGATACTATGTTGCTGTCAGGGCTGGCTGTGACACAGCACCTACATTTGCAACCAGGGGCAAGAAGACAGCAGGGCATACCTGGACTGCAGATGACATGACAACAGATGCCTTCAATGCCCTGTCAAAGCAATACCAAGCATTCAACAGGAGGTGATGTCCATTGTGGAACACTTCACAGTTCTCCTCTATGATGCACCAGCAGCCAACTTAACATCGATCAAGCTTGAAGTCCACTCTTAAGTTGTGGCTGCAATACAAAAAAAGCCTCCTTAAAGTGCACAGCTCTGTGTCAATGTAGAGGAGACTGTGATGGAGACATTGAAGAATAGGTTCAACAACAACAACAAAACAATCAAACGTGTTTCTGAAATACACTGTTCAAAACTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_02900497_02900924.mRNA True 2242 mRNA 0.40 2 2899799 2902102

Neighbor

gene id symbol gene type direction distance location
CI01000304_02694838_02711363 NA coding downstream 188297 2694660 ~ 2711502 (-)
CI01000304_02595522_02611332 GRIN3A coding downstream 288467 2595522 ~ 2611332 (-)
CI01000304_02314977_02384157 NA coding downstream 515642 2314977 ~ 2384157 (-)
CI01000304_02299398_02304171 NA coding downstream 594637 2299143 ~ 2305162 (-)
CI01000304_02244094_02244588 NA coding downstream 655211 2240069 ~ 2244588 (-)
CI01000304_03158811_03160301 NA coding upstream 256391 3158493 ~ 3160301 (-)
CI01000304_03214897_03241215 MUSK coding upstream 311381 3213483 ~ 3241215 (-)
CI01000304_03268621_03269674 NA coding upstream 366519 3268621 ~ 3270242 (-)
CI01000304_03305219_03313206 NA coding upstream 403117 3305219 ~ 3313398 (-)
CI01000304_03398119_03398652 NA coding upstream 495937 3398039 ~ 3400370 (-)
G419756 NA non-coding downstream 5310 2889285 ~ 2894489 (-)
G419640 NA non-coding downstream 96011 2803579 ~ 2803788 (-)
G419524 NA non-coding downstream 261975 2637538 ~ 2637824 (-)
G419499 NA non-coding downstream 309500 2589967 ~ 2590299 (-)
G419498 NA non-coding downstream 310616 2588293 ~ 2589183 (-)
G419777 NA non-coding upstream 39597 2941699 ~ 2941947 (-)
G419783 NA non-coding upstream 61488 2963590 ~ 2963803 (-)
G419840 NA non-coding upstream 177264 3079366 ~ 3079602 (-)
G419842 NA non-coding upstream 183317 3085419 ~ 3086625 (-)
G420221 NA non-coding upstream 485576 3387678 ~ 3389213 (-)
G419354 NA other downstream 633558 2262502 ~ 2266241 (-)
G419353 NA other downstream 663693 2229384 ~ 2236106 (-)
CI01000304_04263955_04264962 NA other upstream 1361643 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 1759714 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 3575349 6480743 ~ 6483986 (-)
G422354 NA other upstream 3728984 6631086 ~ 6631499 (-)
G422378 NA other upstream 3842577 6744679 ~ 6783046 (-)

Expression


Co-expression Network