CI01000304_03127839_03154603


Basic Information

Item Value
gene id CI01000304_03127839_03154603
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3126593 ~ 3154797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_03127839_03154603.mRNA
GTATAAAAACAGCCATCCCAGGGAACTCCCATGCTGCCCTTTTGCAACTCCCACCCTGAGTTAAATGATTCTGCAGGGTGTGAATCAGCTACGCAGGATGCTAGAAGGTCTCAGTGTTTCAGTTTACGCTGCTTGCCTTTGTTTCAACCCGTGCTTACATCAGGAACAACTGAATTGGTTATTCTCTGAGGCATGTGAATATTAAAAGGTCACGTCATTTGTAATACAAAGAAACAGTGGCTATCACGTCAACACAGTCTAGAGGCGCTGTCCATAAACAAACCTGAATTATTTACTGTCTCGACTAAGCCAAGTGTAACTACATGTTAGTTTAAATGCTCTAATGAAGCATAAAGTTTGTTGTATTTGAAGAACTTTCTAGTGACCTTGGTAGGAGGCGACTTTTGCTGTTGTTTTCAAGATTTCTTGTTAGATGACATGTTTACTAGCCATAAAATGATGATAAATACTCCTGTCTGAATTTTTTCAAATTTTCAATGTTAATGTCTTAAATTATACTTCTTGACAGCAATGGCATTAAACTGAGTACAAATTGAGATTTCTACTGCAGTCTCCTGCTACTTTTCTCTAGTTTTCTCAAACTAAAGTCATAAGCCATACACTAGCATTCAAATGTTTTCTTTTTTTATTATTTTTATTTTTATTATTATTATTTATTATATATATATATATATATATATATCCCTCTACCGCATGGTGTTGCCATATGGCAACATACTCTTTGCGTTCATTTCCTTGCCACTGAGACAGCATTGAAGCACTGAAGAGACTTGAAGAGAACATTCTCGGTTTTTTTTTTTGTTGGTGAGAGAAGACCTTAGTTTAGCCAATGTTGTGCTTTGGTTAAGTCACATGACATGCAATTTTTTTCTGTGGCGCGATTTCTGACAGACTGCTGTCTCTTGTCGGTAGTTGCTGAAAGCAAACTAAAATGTCAGTAACAAATAAGGACCAGTCCATGTCACATTCACAAAAAAATTGGTAACATCATCTCAGGTAAGTTATGATGACATATTCACCACTCAAAAAAGTTTTTATGAAAATAGTTTTTGGTAAATCGATAAAATGTCTGTGTTGCCATATGGCAACACTGTGCAATAATGGAATGACATTATTGTAATAGGTTAGCTAGCAAGCAAAGGTCAGCTGCAGTCTGTTAAGCTGTAACAATAACAACATTAATGCTAGTGATATAATGTTGATTAGTCATATGTTAAGAACTGCCATGGCATTTGTATTATGGATTAAATCAACATCGGAGACCTGCCTGCCCACTGCCACCACAGCCAGTACTACTGGCCCAGACCTACCACTGGCCTACCATGGTGTCTCAAAAAGGCAGGTGCAAGTGGCTATGTATCCTCCATCTTGGGCCTGCTGTGAACTGCAGACAACTTCCCAGACAGGAAAGTGCAAGGCTAAGAAAGATGATCTCATCCTTGCAAGTTACAGCAATGAGAAGTCAGACTGAATAAGTGGCTTCAAGTAAATATGGATAATGAGGATGATTATCTTAAATTTTAAAGCGAATTAGCACAAGTAATATTTCAATTGCAATCTGTTTTTTACATTTTAAATGGATAATGCATTGCTGTTTATTTACAGTCATATTTACCACTTTCTCTATCTTGTAACCTATAAAAAAATAAGAATACCCCACCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_03127839_03154603.mRNA True 1686 mRNA 0.37 2 3126593 3154797

Neighbor

gene id symbol gene type direction distance location
CI01000304_02993734_03052509 EPHA5 coding upstream 74084 2993734 ~ 3054991 (+)
CI01000304_02810127_02814735 NA coding upstream 311517 2810127 ~ 2815076 (+)
CI01000304_02672677_02672967 NA coding upstream 453145 2672620 ~ 2673448 (+)
CI01000304_02558750_02584199 NA coding upstream 541398 2558750 ~ 2585195 (+)
CI01000304_02267341_02290220 SNX30, SNX30.S coding upstream 836310 2267341 ~ 2290283 (+)
CI01000304_03193646_03207372 LPAR1 coding downstream 38591 3193388 ~ 3208382 (+)
CI01000304_03261474_03267659 RASSF6 coding downstream 106677 3261474 ~ 3268074 (+)
CI01000304_03278369_03283013 TMEM267 coding downstream 121511 3276308 ~ 3283183 (+)
CI01000304_03353284_03357099 NA coding downstream 196944 3351741 ~ 3357564 (+)
CI01000304_03376929_03378015 NA coding downstream 222074 3376871 ~ 3378183 (+)
G419808 NA non-coding upstream 30655 3095705 ~ 3095938 (+)
G419806 NA non-coding upstream 42248 3084123 ~ 3084345 (+)
G419802 NA non-coding upstream 48784 3077603 ~ 3077809 (+)
G419724 NA non-coding upstream 184643 2941696 ~ 2941950 (+)
G419862 NA non-coding downstream 14637 3169434 ~ 3306051 (+)
G419875 NA non-coding downstream 132604 3287401 ~ 3379400 (+)
G419937 NA non-coding downstream 226726 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 234380 3389177 ~ 3389441 (+)
G420104 NA non-coding downstream 537903 3692700 ~ 3695368 (+)
G418981 NA other upstream 1032915 2092494 ~ 2093678 (+)
G418116 NA other upstream 2251344 872670 ~ 875249 (+)
G418059 NA other upstream 2562142 558092 ~ 564451 (+)
G417987 NA other upstream 2898740 226703 ~ 227853 (+)
G420445 NA other downstream 1148539 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 2018426 5173426 ~ 5176791 (+)
G421162 NA other downstream 3086436 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 4197852 7352621 ~ 7354396 (+)
G421435 NA other downstream 4329344 7484141 ~ 7484688 (+)

Expression


Co-expression Network