CI01000304_03353284_03357099


Basic Information

Item Value
gene id CI01000304_03353284_03357099
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3351741 ~ 3357564 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_03353284_03357099.mRNA
CTATATATGTCAGCATCCTACCTCCTGTAGTTTGTCTCCGTGCCTCTAGAGGTCCCCTGTGTTCCCCTCTGCCTTAGATCTTCCACGTGGGTCCTTGTTAGCATTATCCAGGTTACCTGTGCCTTGTTTCTCCTAGGGTATTTTAGTTGTTTTTTCCCCTTGTTCCTCACTTGTTTTTTGAGTCTTGGCTGCGTGCTTCCTGCTATGTTTCTCCAAGTCCTTCCAAGCTATCTCAAGTAAGGTGTTCTGAGTTATTTGGTTATTAATGTTCTCTAGTTTTGTTTTCTCCCCTCGTGGAGTTTTTATTTTCCCATGTGGTTTTTCCATTATCTCTTGTGTTATTAATACCTCTGTCTGAGAAGAACTTTTGTTGGATTTTTGTTTGAAAAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAATTAATTAATTAATTAAATCTACATTGCCTAGAGTACTGCCTTGAGTGTTTCGTTTGGATCCAACATTACAGTCTCTGTGGCCTAGTGGCAGATATCTCAACTGCCACACCAGAGACCTGAGTTCTAGCCCTGCTTGTGACAATATATAAAAAAGACATTTATAGTTTGTTAAATGCAAATTCCATACACTGACATGGAAGCTGCAATAATCCTTTCAGTTATAATTTGATGAAGTTTTTTTTATTCATATCAGATACAGTGCATATGAAACAAAGTTTACTCTCTTCTCCCAATTCACCAGCCACTTACGTTTATGTATTTCGGGAAAATGGATGAATTTACGTGATGTAGGCTAATTCCGACAGATCCTCTGTTTTATTAACTAACATGATCATTATAAAGGTGTTTAAACAACAAAACACATTCGCTTCCACATATTTGACAATCGGAATATATCATATAATTCATGATATAGTTAACAAGTTTGTGAATATTTTGAATAAAGGAAAAAACTAAATAAACACGATACCTGTCATAGTGTAGCTGCATGATGCAACGCCAAGGGACATTAACGCTTAACGTGGCTTAATGTAGCTACTAAGACAGTAAACAGACCAAATTCAGTAAACATCATACTAATAAAGTATACTATGTACAGAAAAGCAGTTGAGCCCAGAATTTGAATGCAACGCGTTTAAATTCACGCTAAGCGTTTTCGTCGCTTAATGTAGCCTATAAGTGATATTAAAAGATCAAATTCTGCACAAACCAATTTTTCTGTATATGCTTTAATTAGTATAGTGTTTACGAAGTTTGGTATTTTAATGGCACTGTCTTAGTACATTAATCCACATTAAGCGTGTAATTAAACGTGCTGCGTTCATAATCTGGGCTCATCTGCTTTTCTGTACGTAGTATACTTTATTAGTATGGTGTTTACTAAGTTTGGTTTGTTAATAACACTGTCTTAGTAAATTAAGCCACGTTAAGCTTTTTCACGTTAAGCGCTTTAAAATGTCCCGTTGCAGGGGAATTTAAAATAATCCTCTAAAATAACGGTCGCCTTAATAGTGGGGTCAGTTCACACCTCAGGTCTTAGGACTGAGGGACTGGGATGAACAATGGGGAAAATGGTGATAGGATTAGTCTGCTCAATGACATGCTAACGTCATCATTCTCCCCATGCACAAATGGTAAGACCTCTAAAATTAAGCAGAACAACCCTCTTTTGTTTATTGTTTTGGCCGACCAAAACCCACTCCGAGCCACTTCTTTCTTTCATACATCAAAGAGAACATTCTTGGAAATCCTACACTTATCGAACACCACAGCTGAACAAGTCGTCATCAAGCTCAAAGCAACATTCGCACGGTTCAGCATTCCAGAAGTAGTCTTTTCGGATAATGGCCCTCAATTCAAGAGCAAAACATTCCAGGCATTTAGCCGTTTGAGTGTTCTAGAGTTTGATTTTGTAACATCAAGCCCACATCACCCTTCGAGCAATGGACATGCAGAACGTGCAGTCCAGTCAGCAAAAGCCATCCTACGGCAAAAAGACCTAGTATTAGTGAGGCTGAGCTACAGAACGACCTCACATGCATCAACTGGAGTGAGCCCAGCAGAGCTTTTGATGGGATGGAGACATTACCAACTCTGGACTGCAACTTCTTTCCGAAGTGGCCGGATCAGACTGATACGGAGATGAGATGATGCTGCTAAGCAATAACACGCATTGTATTTTAATAGAAGGCATGGAGTGAGAAACTTATCTCTGCTGAGGCCAGGAGATTCAGTCCTTGTTAAGCTGGACAAGGAAAAATGGTGGAGGACTCCAGCAACGGTAATGGGGCAAAGTGCGACGGAATGCTCCTACATGATCAGTAGCCTGGGAGGGGGAATGAAAAGGCGAAACCGCAGTCACTTACAACTAAGTCCCTCTGAGAGCAGTGTTGATGCTGAAACAACATGGCACTCAGGAACAAAGTATGATGATGACATTGTCCGAAGAAACAACTTGCAGCCTACACAGACTAGTGAAGGATGGAGGGTAGAGTGAGTAAACCAGTTGAGAAACTGAATTTGTAATACTTTATGTCTTACAAGTAGTGTAAGAATTGTGGTTAACAGACTTTTCAAATGTCAAGGTTAGTCGTTAAAGTAAAGTAAGTGA

Function

NR:

description
Zgc:153522

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_03353284_03357099.mRNA True 2599 mRNA 0.39 3 3351741 3357564

Neighbor

gene id symbol gene type direction distance location
CI01000304_03278369_03283013 TMEM267 coding upstream 68558 3276308 ~ 3283183 (+)
CI01000304_03261474_03267659 RASSF6 coding upstream 83667 3261474 ~ 3268074 (+)
CI01000304_03193646_03207372 LPAR1 coding upstream 143359 3193388 ~ 3208382 (+)
CI01000304_03127839_03154603 NA coding upstream 196944 3126593 ~ 3154797 (+)
CI01000304_02993734_03052509 EPHA5 coding upstream 299232 2993734 ~ 3054991 (+)
CI01000304_03376929_03378015 NA coding downstream 19307 3376871 ~ 3378183 (+)
CI01000304_03615644_03617791 NA coding downstream 257369 3614933 ~ 3618408 (+)
CI01000304_03666156_03669795 NA coding downstream 308592 3666156 ~ 3670934 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 617468 3975032 ~ 3978545 (+)
CI01000304_03984177_03996203 KATNAL2 coding downstream 626613 3984177 ~ 3996401 (+)
G419862 NA non-coding upstream 45690 3169434 ~ 3306051 (+)
G419808 NA non-coding upstream 255803 3095705 ~ 3095938 (+)
G419806 NA non-coding upstream 267396 3084123 ~ 3084345 (+)
G419802 NA non-coding upstream 273932 3077603 ~ 3077809 (+)
G419937 NA non-coding downstream 23959 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 31613 3389177 ~ 3389441 (+)
G420104 NA non-coding downstream 335136 3692700 ~ 3695368 (+)
G420295 NA non-coding downstream 386277 3743841 ~ 3744102 (+)
G420301 NA non-coding downstream 401933 3759497 ~ 3759761 (+)
G418981 NA other upstream 1258063 2092494 ~ 2093678 (+)
G418116 NA other upstream 2476492 872670 ~ 875249 (+)
G418059 NA other upstream 2787290 558092 ~ 564451 (+)
G417987 NA other upstream 3123888 226703 ~ 227853 (+)
G420445 NA other downstream 945772 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1815659 5173426 ~ 5176791 (+)
G421162 NA other downstream 2883669 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3995085 7352621 ~ 7354396 (+)
G421435 NA other downstream 4126577 7484141 ~ 7484688 (+)

Expression


Co-expression Network