CI01000304_03376929_03378015


Basic Information

Item Value
gene id CI01000304_03376929_03378015
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3376871 ~ 3378183 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_03376929_03378015.mRNA
ACATAAAAGCCTTCCTTTTCTGATTGGGCTTCATCTTGTTTGTTAGTGGGAAAACCCGATGGCAGGTGATCAGCATTTTTGCACTGATTATAGACGAATGAAGATCCTAACTAGACCTGACTCATACCCGTTGCCTAGGATTGAAGGCTGTGTAGACCAAGTTGGATCAGCCAATTTTGTCAGTAAATTTGATTTGCTCAAAGGCTACTGGCAAGTGCCTTTGACTACCCGAGCACAGGAAATTTCCTCTTTCATTACACCTTTTGGATTGTATTCTTACTCTGTAATGAGTTTCGGTCTCAGAAATTCTCCAGCTACATTTCAGCGTTTAATGAACAAAGTGACAGCTTGGTTAGAGAGTTGTGTCGTGTACCTCGATGACATCGTTGTCTATAGTGACACATGGGATCAACACCTTATCCGAATTTGTGCACTGTTTGAAAGTTTGGCAAATGCTAAACTCACAGTCAACTGTGACTTATTTGGGCAAGGTTGTTGGGATGGGAAAAGTGTGACCTCCCTTCGACTGGATAAACCATTCAAATTCCAGGTGGATGCTAGTCAGGTTGGAGCAAGAGCCATCTTGTTGCAGACTGATGAGGACGGTTTTAATCACCCTATCAGATATTTTCACAGTAGTTCAATTCGTATCAGACAAATTACTGTAGAGAAAGAGGCTTTAGCATTGATTTGGGCCCTGCAGCATTTTGAGGTCTATTCTTGTGGGACTATGCCAACTGTGGTTTATATGGAACATAACCCCCTTACTTTTCTTCACTTGCTGCAGAATCCTAATCGACATCTTGTTAGTTGGTCCCTTTTTCTACAGCCTTTGGAGATTCATCATGTGAAAGGTATAGACAGTGTCTTAGCTGACGCATTGTCCTGCGCCCCATGTGGTGGAGAATAAGTCTCTTGGCCATTCTTTCCTCTTTCCTCTTTCCTTTTATTGATTTTCAATTCCTTAGATGTTGCTTTTTCCAGGCGCCGGGAGATTGTTTTGAAACCAAGATGGGTGTGGAGAAAGGGGAAGTTGTAATGGTTTAAAAGACTTGCCGTTAACTCCGGTAAGGTTGCA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_03376929_03378015.mRNA True 1078 mRNA 0.42 2 3376871 3378183

Neighbor

gene id symbol gene type direction distance location
CI01000304_03353284_03357099 NA coding upstream 19307 3351741 ~ 3357564 (+)
CI01000304_03278369_03283013 TMEM267 coding upstream 93688 3276308 ~ 3283183 (+)
CI01000304_03261474_03267659 RASSF6 coding upstream 108797 3261474 ~ 3268074 (+)
CI01000304_03193646_03207372 LPAR1 coding upstream 168489 3193388 ~ 3208382 (+)
CI01000304_03127839_03154603 NA coding upstream 222074 3126593 ~ 3154797 (+)
CI01000304_03615644_03617791 NA coding downstream 236750 3614933 ~ 3618408 (+)
CI01000304_03666156_03669795 NA coding downstream 287973 3666156 ~ 3670934 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 596849 3975032 ~ 3978545 (+)
CI01000304_03984177_03996203 KATNAL2 coding downstream 605994 3984177 ~ 3996401 (+)
CI01000304_04170630_04190266 NA coding downstream 792447 4170630 ~ 4190266 (+)
G419862 NA non-coding upstream 70820 3169434 ~ 3306051 (+)
G419808 NA non-coding upstream 280933 3095705 ~ 3095938 (+)
G419806 NA non-coding upstream 292526 3084123 ~ 3084345 (+)
G419802 NA non-coding upstream 299062 3077603 ~ 3077809 (+)
CI01000304_02993734_03052509 EPHA5 non-coding upstream 321880 2993734 ~ 3054991 (+)
G419937 NA non-coding downstream 3340 3381523 ~ 3381763 (+)
G419940 NA non-coding downstream 10994 3389177 ~ 3389441 (+)
G420104 NA non-coding downstream 314517 3692700 ~ 3695368 (+)
G420295 NA non-coding downstream 365658 3743841 ~ 3744102 (+)
G420301 NA non-coding downstream 381314 3759497 ~ 3759761 (+)
G418981 NA other upstream 1283193 2092494 ~ 2093678 (+)
G418116 NA other upstream 2501622 872670 ~ 875249 (+)
G418059 NA other upstream 2812420 558092 ~ 564451 (+)
G417987 NA other upstream 3149018 226703 ~ 227853 (+)
G420445 NA other downstream 925153 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1795040 5173426 ~ 5176791 (+)
G421162 NA other downstream 2863050 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3974466 7352621 ~ 7354396 (+)
G421435 NA other downstream 4105958 7484141 ~ 7484688 (+)

Expression


Co-expression Network