CI01000304_03483866_03493010


Basic Information

Item Value
gene id CI01000304_03483866_03493010
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3483840 ~ 3493010 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_03483866_03493010.mRNA
ATAAAATGCAGTTATGGTGTATTAAAATTGAATTGCCAATTCTATGCCACCTCGTGGCAATACTTGGAAGCAAAGAAGGAAGGAAACCTAAGATCTGATATGGCCATAAATGAAGTACCTGCTAATTGCATAATGGGAATTAGGCATTCTGAGCTATCGAAAGGTAGCAGATATGAGGAATTGTTCCTGGGCTTTGTTGTGTCGTGCCAGTGCGCCACCGTTTACGCGCCCTATCGCTGCCTGCCCACAGCTTCAACAGATAAGCAGGCAGGAAACAAGAAATGGATTTATTTGATGCTCCGTAATAGCACGGTCTGGAAAAAGTGGACAGGCAACCCCCTTAATGAGAATCCTCAAAGGGAACAAGGCAGAGGGCAAAGCAATGACTCCCGTGCCAGGATTCAGTATGAAAGGATAGGATGTGATGTCACCATGCAGTGTGGCTCACTGGACAACGACGCCTCTGTAACATGGAAGGTGAATGGCACGGACGTGAAGGCCCGTCGGCGAGAAGAAGGACCACGGCTCATCTTGATGGAGCGGCTGGGTCATGGGCAAGACGGCTCAGCTAACAAGATAAGTTCTGCAGCTAAGTGTCTGAATGAGAATGGCATGGTCCCAATACCACAGACAGGGAGAGGCCCCTCCGCAACTGTAAGAAACAAGAGAAAGCCATTAAAGTGGCATGTTTTGTCTGCCCTGGGAAAAAGCTGCTTTCCTGCAGGACAAAGTGCTGGGTCTACAGTAAGCAATGCTGAGGGTTCAGGCAGGACCACAAAGTATGCAAGGGGAAGGAGGAGGTTGCAAGAAGACATATGTCGAGGTCATCACTTCTTTACTTGAGTGCTCACAATGCCGTAACTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_03483866_03493010.mRNA True 869 mRNA 0.48 5 3483840 3493010

Neighbor

gene id symbol gene type direction distance location
CI01000304_03408538_03449725 CNTFR coding downstream 33939 3408256 ~ 3449901 (-)
CI01000304_03398119_03398652 NA coding downstream 83470 3398039 ~ 3400370 (-)
CI01000304_03305219_03313206 NA coding downstream 170442 3305219 ~ 3313398 (-)
CI01000304_03268621_03269674 NA coding downstream 213598 3268621 ~ 3270242 (-)
CI01000304_03214897_03241215 MUSK coding downstream 242625 3213483 ~ 3241215 (-)
CI01000304_03529068_03531228 NA coding upstream 35517 3528527 ~ 3531304 (-)
CI01000304_03763183_03764351 NA coding upstream 270145 3763155 ~ 3764411 (-)
CI01000304_03830154_03833600 NA coding upstream 335181 3828191 ~ 3833600 (-)
CI01000304_03845300_03848892 NA coding upstream 350589 3843599 ~ 3849333 (-)
CI01000304_03882070_03891383 NA coding upstream 388768 3881778 ~ 3892332 (-)
G420150 NA non-coding downstream 5731 3419922 ~ 3478109 (-)
G420221 NA non-coding downstream 94627 3387678 ~ 3389213 (-)
G419842 NA non-coding downstream 397215 3085419 ~ 3086625 (-)
G419840 NA non-coding downstream 404238 3079366 ~ 3079602 (-)
G419783 NA non-coding downstream 520037 2963590 ~ 2963803 (-)
G421465 NA non-coding upstream 266408 3759418 ~ 3759745 (-)
G421471 NA non-coding upstream 295709 3788719 ~ 3788926 (-)
CI01000304_04007023_04008270 YEE9, IER3IP1 non-coding upstream 510029 4006069 ~ 4009056 (-)
G421655 NA non-coding upstream 614253 4107263 ~ 4107557 (-)
G421663 NA non-coding upstream 743287 4236297 ~ 4237760 (-)
G419354 NA other downstream 1217599 2262502 ~ 2266241 (-)
G419353 NA other downstream 1247734 2229384 ~ 2236106 (-)
CI01000304_04263955_04264962 NA other upstream 770735 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 1168806 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 2984441 6480743 ~ 6483986 (-)
G422354 NA other upstream 3138076 6631086 ~ 6631499 (-)
G422378 NA other upstream 3251669 6744679 ~ 6783046 (-)

Expression


Co-expression Network