CI01000304_03615644_03617791


Basic Information

Item Value
gene id CI01000304_03615644_03617791
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 3614933 ~ 3618408 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_03615644_03617791.mRNA
TTATAAATCAACCTGTTATCTGCTTCCAAATTGAATTACATTTGTTTTCACTTTTATGTGGTGAACAAATAACTTGGAAACCTTTTTTTTTCCAGACTGTTTTGGGGCACAGTGTTAAATCACTGCAGTTTCCCTTTTGCAGAGACCTCCAAGCTTGCAATGTAAAGATAATAAAATAGTTCCTCTTGAGATGTTGAAAGACTTTGGATTTTAAGAGGCTAGCAGGTTTGGCAAATGGATATGAATAATAAACTACAGCAGCTTTATGTTCGCACTGAGGAACAAGGATTCGTGGAATAAACAGTTGTGTGCATTATCAGAATATTTCAACAACGCACTAATTTAGCCTCAGGAACGAAGCAATGGGCGTCTAGAGGCATCTACGGGTGAAAGCGCATAATTCAAGGAAGTACTGTAAATATTTACGTACTATTTACTTCCTGTTTAACTCCACATGGAAAAAACAGTAAACTCTTGGTGAAATTTGCATACTTATTGGCCTCTGACACTCAAACTATAGAGCACCACCAATTGCTTAAAGGTCACAAATGAAAGTTCTGAGATGGAGTTCTGAGTTCTGGATGTGAATCTGGGCCCCATCACCAAAGAAGAAATAAAGAAAGCTTCCCAGAAGATCAAGGGAAAGCACCAAGACCCAACAACATTTCCCTGGAAGCCCTGGAATCAGACCTTGGAACTACAGCAGACATCATGGTGGACTTGCTGAAAGAGGCATTGGAGAAGGAAGAAATACCAGTGAAATGGAATGCAGGCTATATAATCAAGCTTCCCAGGAAAGAAGACCTTAGTGAATGTCAGAACTGGAGAGGAATCCAGCTCCTGTTCCTCCCAAGTCCCGTGGATTCCGCACTTGTGCCACGGGATTGCAGACCTCTATTCCCAAGCAAGGTTTTCACCAGAGTGATACTGGACATGATTAAGGTGTCAGTTGATGCCAAGCTGAGAGAAGAGCAAGCAGGATTCTGGGCCACAAGATCATGGTCACACACCGCGGAGGCGCTTGCTGCTGCATTCAGCTTGTTTCAAGCATTGGGAATCCCGAAGGAAAAAGTGCACGTTTTTCTAAGGGATAATGCAAAGAACATGGAAAAGGCCATGAAGGATGGCAATCTACCCAACCTGCCGTGCATGGCGCATTCACTCCAGCTCACTGAGGCCAAGGGAGTTATGTCTCAATGCAGCATCACTTATATAATTGTCTCTGGAAGACACATCGTCAGTCATTTCAAACAATCCCCTCTTGCCTACTCCCAACCTCAAAGTATTCAGAAACAGCTGGGCCAGCCTATCAAGAGACTACAGCAAGATGTACCTACCAGGTGGAACACAGGCAGTGGAAAAATGATTTTGCTACTCGCCCCATTTGAAGAGCTCACACAACAGATCAGCTCATCAACTGCATCAGCTGGAGATGTTATACCATCCATCAGAGCTTTAACTCATCTTCTTGAGAAGACCGCAGAGACTGACCATGGTGTAAAAACTTCAAAAGCCACGTTGTTGGAAGCGGTCCAGAAATGATTCTGTGACACTGAATCTGAGTACCTGTATAGCATCGCTTCAATCCTCGATCCGAGGTGAGAAAACTTAATTTACACATTCTTCAAATGTGTGTGTGTGTAGCTGTGTCACTGTTAGAGCGAATTAAAGAGCAGGAAAATGAGTATTGAAAACGTTTAAATTCAGAATCTATTAAATTGGAACATATATATTTTTTGACTATTCTAGAAGGCTCCTTAATTCATATTGCAAGACTATGTATCTTTGCTGTAAATGACTGATAAAAGAAGCAATTACTGAAATGAATAAGGTGTTATTGTGTTACTCTTTTGTGTAGGCTGGTATTTACTTCAAATTTGGTTAAATTTGCTTTAAAATTAAGCAGTTGGACGAATTAACAATAAGACTACAGAAAAAAAAAAAAAAAGCATATTATTTTGGAGTATGCTAGGCTGACTAATCAAAACAAGAGCCAAGCATAACCTTCAAAACTCATTAAATAATAGAAAGTTTCTTATTCTATATTTTCTTTTTTCTTTTTCTGTCCTGTTACATATTTCTTTTCTAAAATGGAGCAACTAACTCAATCACTAAAGTATTTCTGATTATGATTTTTGACAAATTCACATTAAATTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_03615644_03617791.mRNA True 2159 mRNA 0.40 4 3614933 3618408

Neighbor

gene id symbol gene type direction distance location
CI01000304_03376929_03378015 NA coding upstream 236750 3376871 ~ 3378183 (+)
CI01000304_03353284_03357099 NA coding upstream 257369 3351741 ~ 3357564 (+)
CI01000304_03278369_03283013 TMEM267 coding upstream 331750 3276308 ~ 3283183 (+)
CI01000304_03261474_03267659 RASSF6 coding upstream 346859 3261474 ~ 3268074 (+)
CI01000304_03193646_03207372 LPAR1 coding upstream 406551 3193388 ~ 3208382 (+)
CI01000304_03666156_03669795 NA coding downstream 47748 3666156 ~ 3670934 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding downstream 356624 3975032 ~ 3978545 (+)
CI01000304_03984177_03996203 KATNAL2 coding downstream 365769 3984177 ~ 3996401 (+)
CI01000304_04170630_04190266 NA coding downstream 552222 4170630 ~ 4190266 (+)
CI01000304_04190428_04208535 NA coding downstream 572020 4190428 ~ 4208698 (+)
G419940 NA non-coding upstream 225492 3389177 ~ 3389441 (+)
G419937 NA non-coding upstream 233170 3381523 ~ 3381763 (+)
G419875 NA non-coding upstream 235533 3287401 ~ 3379400 (+)
G419862 NA non-coding upstream 308882 3169434 ~ 3306051 (+)
G419808 NA non-coding upstream 518995 3095705 ~ 3095938 (+)
G420104 NA non-coding downstream 74292 3692700 ~ 3695368 (+)
G420295 NA non-coding downstream 125433 3743841 ~ 3744102 (+)
G420301 NA non-coding downstream 141089 3759497 ~ 3759761 (+)
G420319 NA non-coding downstream 196885 3815293 ~ 3815758 (+)
G420330 NA non-coding downstream 215812 3834220 ~ 3834606 (+)
G418981 NA other upstream 1521255 2092494 ~ 2093678 (+)
G418116 NA other upstream 2739684 872670 ~ 875249 (+)
G418059 NA other upstream 3050482 558092 ~ 564451 (+)
G417987 NA other upstream 3387080 226703 ~ 227853 (+)
G420445 NA other downstream 684928 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 1554815 5173426 ~ 5176791 (+)
G421162 NA other downstream 2622825 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3734241 7352621 ~ 7354396 (+)
G421435 NA other downstream 3865733 7484141 ~ 7484688 (+)

Expression


Co-expression Network