CI01000304_04223309_04223602


Basic Information

Item Value
gene id CI01000304_04223309_04223602
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4223309 ~ 4223769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_04223309_04223602.mRNA
AGCTTCGGCATGTCTGCCCCTGCCACCATCCCTCTGGATAAAGAAGGTGGCGAGTCTCATCATCTGATTACATGTGACCATGTCATATGCCAGTATGGTAGATGTGTGCTGGTGAACGGAGAGTCCAGCTGTGAATGTAATCTGGGATACACGGGAGATACCTGTAACGAAACCATCAATGAGGCTCTGTCTGTACCACTCACCCTCGGCGTCCTGGTGTTCATCATCGGCATTATCATCCTGATCTTTGGGCTGGCATTTTTCCGACAAAGCCAAAAGGCAAAGAAGAGGTGAGTTTACCTGGATTCCTTCCTTTTTTTTTTTTGTTCACTCATTCATTTTTTTTTAATTAATGTATTCAAGAATGCTGTTAATGCATACAATGGCATGAATGTACCTAACTTTTTAATATGTTAAATTCATTCAGATTGTTTTTTACATTTAAAAAAAATGTCAGGGTA

Function

NR:

description
hypothetical protein cypCar_00012770

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_04223309_04223602.mRNA True 461 mRNA 0.41 1 4223309 4223769

Neighbor

gene id symbol gene type direction distance location
CI01000304_04190428_04208535 NA coding upstream 14611 4190428 ~ 4208698 (+)
CI01000304_04170630_04190266 NA coding upstream 33043 4170630 ~ 4190266 (+)
CI01000304_03984177_03996203 KATNAL2 coding upstream 226908 3984177 ~ 3996401 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding upstream 244764 3975032 ~ 3978545 (+)
CI01000304_03666156_03669795 NA coding upstream 552375 3666156 ~ 3670934 (+)
CI01000304_04236578_04239825 NA coding downstream 12569 4236338 ~ 4240395 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 94382 4318151 ~ 4331892 (+)
CI01000304_04346530_04362348 VLDLR coding downstream 122761 4346530 ~ 4363156 (+)
CI01000304_04365876_04367947 KCNV2, KCNV2A coding downstream 141842 4365611 ~ 4368201 (+)
CI01000304_04381131_04396006 TRAPPC13 coding downstream 157362 4381131 ~ 4396075 (+)
G420466 NA non-coding upstream 115751 4107238 ~ 4107558 (+)
G420464 NA non-coding upstream 117432 4105637 ~ 4105877 (+)
G420456 NA non-coding upstream 151352 4071703 ~ 4071957 (+)
G420454 NA non-coding upstream 159762 4063271 ~ 4063547 (+)
G420333 NA non-coding upstream 213313 3942452 ~ 4009996 (+)
G420436 NA non-coding downstream 10040 4233809 ~ 4275246 (+)
G420438 NA non-coding downstream 39679 4263448 ~ 4265201 (+)
G420504 NA non-coding downstream 69796 4293565 ~ 4293939 (+)
G420513 NA non-coding downstream 85050 4308819 ~ 4309407 (+)
G420642 NA non-coding downstream 328297 4552066 ~ 4552528 (+)
G418981 NA other upstream 2129631 2092494 ~ 2093678 (+)
G418116 NA other upstream 3348060 872670 ~ 875249 (+)
G418059 NA other upstream 3658858 558092 ~ 564451 (+)
G417987 NA other upstream 3995456 226703 ~ 227853 (+)
G420445 NA other downstream 79567 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 949454 5173426 ~ 5176791 (+)
G421162 NA other downstream 2017464 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3128880 7352621 ~ 7354396 (+)
G421435 NA other downstream 3260372 7484141 ~ 7484688 (+)

Expression


Co-expression Network