CI01000304_04236578_04239825


Basic Information

Item Value
gene id CI01000304_04236578_04239825
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4236338 ~ 4240395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_04236578_04239825.mRNA
CTTTATATAGGCTACAATACATCATTTTAACTGCCTCGAAAGCACATTTGCCCACCTGTTTATTTGTTCATCTGACATGGTATTATTAGAAGAGGTCACACTCGCAGTAAACCGGAGGCGTGCACGCCTGCGCGCTCACGACCTGTGCGTGTGAATTTCCTTCTTGTCACTCACATGTGTTACAGTGCGATAGAGAAACTGTTAAACAGTCGCAGCGTTAGAAGCGAAAGAGGAAGGAAAATGAAGATGTACTTTTCAACGGTGGTGATATTAGCAGCATCAGCAAATGTCACTGAGGGACTAACAACGAATCAGTCTTTCCCAACGGTCGTCAGTACAAATCAAAAACCAACTGATTTACCTACGTCTTCCTCGAGCACTACGAACGACTCTACATCAGCTCAGACAACGTCAAATACAACCTCTAGCGATAATACTACCTCTACAGCAACTGAGCTCACCAGCGTAGTCAATAATGCGACTAACGCGTCGACCACAATCACATCGAGTTTGGTGACTGAAACTCACACAACATCCTCTTCAGCGAGTCTTACCTCAGAGAAAACAACGCTGGGGAGCACGGCAGTGGTTGTTGCTAGTGCCAAAACTACATCTACGGCAACTATTACAACTAAACCGGTGTCCTCTTCTACTAGTGTAGTAATGACAACCGAAAAAACGAAAACCATCTCAACACAAGACAAAGATAGTGTTGAACAAGAAAAGAAGAACCCAGAGGCCCTGAGCTCAGTAAGTGTTGCTGCCATCGTAATTGGCTTCCTTGTCATTGTATTAATCTTACTTGGTGGGGCGTACTACTTCAAAATGCGACGTTCTTCTTACGGACGCCTTTTGGATGATACTGATCACAGCACTGTGGGGAATTTTCTCAACCCAATGTTTGATGGTTAAAAAGGGAAGTGTTCATGAAGAAACATTAATTTCTGAGGAACAACCTACACACATTTCTTTAGCAATGAATACGATGGCATCAGATTATGTATTTTGGCCTCAAAATTGCCACGTCAATCTTCATCTAAATCGCCTAAACATAGATCATACACTGAAGAGAATCATCAAGAAGTTTTTCAAATGTACACTCTTAAGAATAAAGGTTCCAAAAGGGGGTTCTCACTCTTCCATAGAAGAGCCAGTTTTGGTTCCTCAAAGAATCCTTCAAGAACCATTTTTAGAACCTTTTTTTTCCACTACAAAGAACCTTTTGTGAAATGGTAAGATTCCATAGATATTAAAGGTTCTACATGGAACCATCAATGCCAATAGGGAACCTTTACTTTTAAGAGTGGCGAGACTTTCTGAAAGTTTTACTATGAAGGCTGGAAGTGATGTCCTAGAAATGTAATTTTTGTTTGTTTGTGAAATGTATTTTCTTATTGTATTGGGTATATTTTCTGACTAACTAGTTTGCTCTGATTAAATGCACACACTGTTCGTCTCATGATCGTATTTTTTTCAGTGTAA

Function

NR:

description
prostate androgen-regulated mucin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_04236578_04239825.mRNA True 1482 mRNA 0.40 4 4236338 4240395

Neighbor

gene id symbol gene type direction distance location
CI01000304_04223309_04223602 NA coding upstream 12569 4223309 ~ 4223769 (+)
CI01000304_04190428_04208535 NA coding upstream 27640 4190428 ~ 4208698 (+)
CI01000304_04170630_04190266 NA coding upstream 46072 4170630 ~ 4190266 (+)
CI01000304_03984177_03996203 KATNAL2 coding upstream 239937 3984177 ~ 3996401 (+)
CI01000304_03975032_03978067 SIGMAR1, SIGMAR1.L coding upstream 257793 3975032 ~ 3978545 (+)
CI01000304_04318151_04331824 SH3BP2 coding downstream 77756 4318151 ~ 4331892 (+)
CI01000304_04346530_04362348 VLDLR coding downstream 106135 4346530 ~ 4363156 (+)
CI01000304_04365876_04367947 KCNV2, KCNV2A coding downstream 125216 4365611 ~ 4368201 (+)
CI01000304_04381131_04396006 TRAPPC13 coding downstream 140736 4381131 ~ 4396075 (+)
CI01000304_04407815_04421342 NLN coding downstream 166959 4407354 ~ 4421434 (+)
G420466 NA non-coding upstream 128780 4107238 ~ 4107558 (+)
G420464 NA non-coding upstream 130461 4105637 ~ 4105877 (+)
G420456 NA non-coding upstream 164381 4071703 ~ 4071957 (+)
G420454 NA non-coding upstream 172791 4063271 ~ 4063547 (+)
G420333 NA non-coding upstream 226342 3942452 ~ 4009996 (+)
G420438 NA non-coding downstream 23053 4263448 ~ 4265201 (+)
G420504 NA non-coding downstream 53170 4293565 ~ 4293939 (+)
G420513 NA non-coding downstream 68424 4308819 ~ 4309407 (+)
G420642 NA non-coding downstream 311671 4552066 ~ 4552528 (+)
G420655 NA non-coding downstream 379727 4620122 ~ 4620710 (+)
G418981 NA other upstream 2142660 2092494 ~ 2093678 (+)
G418116 NA other upstream 3361089 872670 ~ 875249 (+)
G418059 NA other upstream 3671887 558092 ~ 564451 (+)
G417987 NA other upstream 4008485 226703 ~ 227853 (+)
G420445 NA other downstream 62941 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 932828 5173426 ~ 5176791 (+)
G421162 NA other downstream 2000838 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 3112254 7352621 ~ 7354396 (+)
G421435 NA other downstream 3243746 7484141 ~ 7484688 (+)

Expression


Co-expression Network