CI01000304_04263955_04264962


Basic Information

Item Value
gene id CI01000304_04263955_04264962
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4263846 ~ 4265201 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_04263955_04264962.mRNA
ATGACTTCCTCAGAAGAATCAGATTCACTTGATTTAGACTCGTTTGATTCAGAATTTGAATCCTGTCTGGATGAATCATCTTCCTCTGAACTGGATCTTGACTGCACAGACTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCGCTTTCCTCTGAACTGGATCTTGACTGCACAGACTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAAAGAATCATCTTCCTCTGAACTGGATCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAAAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCCCTGAACTGGAACTTGGATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACCGACGATTCAGAGAATCACTTTCCTCTGAACCGGATCTTGAATCACTTTCCTCTGAACTGATTCTTGACTGCACAGAGTCTGATGAATCAGATCCTCTGCGCAAAGGAAACTGAGGATTCAAACAGTTGAAAAAAGTATCATTATTAATAGTACTTTATTCTTTTGAAAGAAACCAAAGTAGCTATAAAAGTAACATTTTATATATGTAAAAAACATAATAAA

Function

NR:

description
PREDICTED: aftiphilin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_04263955_04264962.mRNA False 1117 mRNA 0.42 1 4263846 4264962

Neighbor

gene id symbol gene type direction distance location
CI01000304_04253975_04256004 NA coding downstream 6244 4253411 ~ 4257602 (-)
CI01000304_04230808_04231542 NA coding downstream 31945 4229815 ~ 4231901 (-)
CI01000304_04227914_04228723 NA coding downstream 34703 4227120 ~ 4229143 (-)
CI01000304_04161154_04166640 NA coding downstream 97206 4160216 ~ 4166640 (-)
CI01000304_04144667_04151439 MAD2, SMAD2 coding downstream 110313 4144460 ~ 4153533 (-)
CI01000304_04269487_04273391 NA coding upstream 4240 4269202 ~ 4273391 (-)
CI01000304_04370274_04377315 PUM3 coding upstream 105312 4370274 ~ 4377481 (-)
CI01000304_04396799_04405867 SGTB coding upstream 131826 4396788 ~ 4405867 (-)
CI01000304_04429949_04448465 NA coding upstream 164655 4429617 ~ 4448468 (-)
CI01000304_04458463_04459040 NA coding upstream 192651 4457613 ~ 4459234 (-)
G421663 NA non-coding downstream 26086 4236297 ~ 4237760 (-)
G421655 NA non-coding downstream 156289 4107263 ~ 4107557 (-)
CI01000304_04007023_04008270 YEE9, IER3IP1 non-coding downstream 255567 4006069 ~ 4009056 (-)
G421471 NA non-coding downstream 474920 3788719 ~ 3788926 (-)
G421465 NA non-coding downstream 504101 3759418 ~ 3759745 (-)
G421719 NA non-coding upstream 38194 4303156 ~ 4303880 (-)
G421723 NA non-coding upstream 47397 4312359 ~ 4314973 (-)
G421728 NA non-coding upstream 70762 4335724 ~ 4335942 (-)
G421740 NA non-coding upstream 98504 4363466 ~ 4363736 (-)
G421741 NA non-coding upstream 99316 4364278 ~ 4364601 (-)
G419354 NA other downstream 1997605 2262502 ~ 2266241 (-)
G419353 NA other downstream 2027740 2229384 ~ 2236106 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 396854 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 2212489 6480743 ~ 6483986 (-)
G422354 NA other upstream 2366124 6631086 ~ 6631499 (-)
G422378 NA other upstream 2479717 6744679 ~ 6783046 (-)
G422810 NA other upstream 3365197 7630159 ~ 7652703 (-)

Expression


Co-expression Network