CI01000304_04876496_04883240


Basic Information

Item Value
gene id CI01000304_04876496_04883240
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4876336 ~ 4883702 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_04876496_04883240.mRNA
CTATGAAAGGGGTGGTGTCTTCAACACGTGACCAGGCTTTTACTTTATTCTAGATCTTTCAGGACGATATAAAGAATTCATCCCTTACTTCATACTTTCTTTTTCAGACAGTGCTTTTTCAGTTGTGTCTTTGTGTTTTGAAGGACCATCGTTATTTACAATGGCACCTTACTTTACCACTGATTACTTAATGGAACTTTTTGTACCAGCCGGCAGTGCATTTGTTGCCTTTTTGTTTTGGATTATTTTCCAGTTTGTGTTTAAACTGGATTTTGAATGTCCTTGTGACCCTGGGGAAAATACTCATGTCTGCGCAGTTTACATGACTTTTCCCGCCATCTCACTTTGCATTGTAGTGGTGATAGCTGACAAGAGCATAAGGAGCATTTTCTGCAGAAATGGAACAGGAATACAATGCAAGAGCATTATTCTTTTAATGTCATTAATTAAAGCTTTCTCTGTAGTGTGCCTGTGGATAATTACAGTACTGATTGATGGGGACTGGTATGCGTGCCTTGCAACAACTAACTATACTTTGCCTCCTTATGAGCAAAGTTTTTGCAAAATTATCAAAACCCCTGCTGAAGCTGCAGATATCCGAACCAAGAAAAGTTTATCACGAGAGATCGCCATTTTGATTTTATTTGCACTAAGTCTCGTTTGGACATTCACAGCTATAAGACAATCTCACTGCATGCAGCCACTTGCATATCAGTATAATAAGTTTCTGCTGGAGGAGACTGACCTTTATATAACAAAGGAATTGAAAAACCTGGCTGAAGACAAGGCAAAGACAAGAGGACAGCAACAAATACACAATTTGAATGAATGGAGAGGTGGGCCTTCCATTGTGCTGACGAAAGTTTACAGTTGCTTGGACACTGCAATGATGGAGGAGAAATTTGTTGTGGTTGTCGCGGGTTACCCGGAGCTGTATGACTTCTCAAACGGATAGTAAATAATATGACAGTTTAACAGCGAACCAAAGAGCGCTCGCGCTACACCGACAGGACAGCTGATTCACTGGTTGCCTAGCAACATAAAAAACTGCAGCACATTGCTCTTTTTTTTCTAAAATTAACCAAAAAAAGTTTTTCAGACCTGAAAAACGTGTTCCGTCTGATCGGGGCCTTAGGCTCTCACACATATCAGGAATGCAATAATGTTTATTCATTTGAATATTCGAGTTCTATTCGAGTTCTTATTCATTTTTATTTTGCTGTTCTCATGGTAGCTGTATGAGACATGTAAAGACATCTGTGGGTCAGTAGTGCACCACATGTATCCACTAACACACACGCATTCTTGAGATATTTAACTCTTTAGGTTTTACAGCACCATTGGTCCCTATATGTTAAAATGTGACAATGATTCATTAGTAAAAGTTAATATCAGCTGAAGTTTGTCTGTGTGTGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC102081577 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_04876496_04883240.mRNA True 1417 mRNA 0.39 3 4876336 4883702

Neighbor

gene id symbol gene type direction distance location
CI01000304_04866074_04866590 PLAC8.1 coding upstream 9266 4864986 ~ 4867070 (+)
CI01000304_04708075_04768393 ADAMTS6 coding upstream 107755 4707405 ~ 4768581 (+)
CI01000304_04687431_04705845 ADAMTS6 coding upstream 170394 4687431 ~ 4705942 (+)
CI01000304_04679406_04680031 NA coding upstream 196299 4679300 ~ 4680037 (+)
CI01000304_04650911_04659754 TRIM23 coding upstream 215880 4650911 ~ 4660456 (+)
CI01000304_04902333_04911640 LIN54 coding downstream 16513 4900215 ~ 4911778 (+)
CI01000304_04989817_04997932 NA coding downstream 104660 4988362 ~ 4997932 (+)
CI01000304_05085761_05095609 AK3 coding downstream 201894 5085596 ~ 5096251 (+)
CI01000304_05122605_05137890 EXD3 coding downstream 238903 5122605 ~ 5138169 (+)
CI01000304_05149465_05165999 NA coding downstream 264995 5148697 ~ 5166172 (+)
G420728 NA non-coding upstream 3045 4871227 ~ 4873291 (+)
G420615 NA non-coding upstream 12477 4863383 ~ 4863859 (+)
G420694 NA non-coding upstream 68279 4807858 ~ 4808057 (+)
G420693 NA non-coding upstream 68492 4807364 ~ 4807844 (+)
G420692 NA non-coding upstream 69117 4806806 ~ 4807219 (+)
G420542 NA non-coding downstream 32433 4916135 ~ 4916905 (+)
G420543 NA non-coding downstream 35669 4919371 ~ 4922423 (+)
G420561 NA non-coding downstream 40507 4924209 ~ 4924509 (+)
G420735 NA non-coding downstream 42586 4926288 ~ 4926510 (+)
G420736 NA non-coding downstream 43013 4926715 ~ 4927094 (+)
G420445 NA other upstream 572504 4303336 ~ 4303832 (+)
G418981 NA other upstream 2782658 2092494 ~ 2093678 (+)
G418116 NA other upstream 4001087 872670 ~ 875249 (+)
G418059 NA other upstream 4311885 558092 ~ 564451 (+)
G417987 NA other upstream 4648483 226703 ~ 227853 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 289521 5173426 ~ 5176791 (+)
G421162 NA other downstream 1357531 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2468947 7352621 ~ 7354396 (+)
G421435 NA other downstream 2600439 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 3094926 7979078 ~ 7980735 (+)

Expression


Co-expression Network