CI01000304_05085761_05095609 (AK3)


Basic Information

Item Value
gene id CI01000304_05085761_05095609
gene name AK3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5085596 ~ 5096251 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_05085761_05095609.mRNA
GTATTTATCGTTTTGACCCCACAGAGGACTGCACGTCCCAGAATCACTTTAAATCATATTGATTTCATAGGATTGCAGTTGTCGGAGAGATGTTGTGAATAGGACATATTTCTTTAATTTCATATTATCAAATAGTTACTAAAGGTTGCATTCTCAAATCTAAGTATGGGTCTGCAGACTGTGTTCCGTGCTGTGATCATGGGGGCCCCGGGCTCAGGGAAGGGGACCGTGTCTAGTCGGATAGCGCAGAGTTTCGGACTAAAGCATCTCTCCAGCGGGGACATGCTACGGGCCAATATCGAGGCGAAGACGGATTTGGGTCTTCTGATGAAGTCATGTATCGATCAGGGTCAGCTGGTTCCTGATGATGTCATCTCTCGTCTCATCCTGTCCAATCTGAGGGGTATAGAGCAGACCAGCTGGCTGCTAGACGGATTTCCTCGTACCGTGGCTCAGGCCGAGGCCCTGGACGCAGTGTGTGATGTGGACTCTGTTATAAACCTAGACGTGCCTTTCCAGACCATCAGAGAGCGTCTGACATCTCGCTGGGTGCACCTTCCCAGCGGCAGGGTCTATAATATAGACTTCAACCCACCGAAGAAGCCAATTTGTGCATTAGACGCGCGTCGTGTCGCCGACATAAATTACAATGATTATGTATTGGGTCTTGATGATGTCACAGGAGAGCCGCTGGTCCAGAGAGACGACGACAGTCCCGAAACTGTCTCCAGGAGACTAAAGGACTATGAGAGACAGACACAACCAGTTCTAGAGTATTACAGGAGTAAAGGAGTGTTGGAGACATTCACAGGAACTGAAACCAACAAGATATGGCCTCACGTTCATGCCTTCCTGACCAGGAAAATCCCAGGAACCCAGCAAGCTATGGGAAAAGCATGATTCTACAACAACTGAAGTACACTGTCTGAAGCAAGCACAATGCACCTCTGTGGCCTTAAGCAGTCTACTGTACTGTATTTGGAGTAACATGCTGAAGCCTTTGGTGCTGCCATCTGGTTTTATGCCTTTGTGAGAAAGTTAGTGGCAATCTAAAGGTTTATGGTCAAACCAGCCTTCTGAGCTTTAGTGCTGCACCTTAAGCAAACAAACTAGCTTAGACTGTCATAGCGGTAGGCATGCTAAGATTAATAGCTGACTCTTCCCACTTGGTAGAAGTGCCCAAACCGTAAGAATGTTTTCTTTTAACTGAAGTGGCTCCAAAATATTCCTGTTTATTATCCATAATAGTATTTTAATGTTATTGAAATCTCATGCTAGAGAAGTATTTAAACATTTCTCAGATGAATGCAGTGCAAAAATATGATTCAAACCTGATTTTGACTACCCATTTTGTGTGAACCACTGTGGCCTTAATTAGCAAATACAGTCCGATTATGAGTCTGATGATTGCAAAGCAATGTTTAATTGTAGATTAATTGAATTAATAGTGTTAGCAGAGTTAATATTTTTTAGCATATACAAAATAGTGTTATATTTTGAATAATTTTTTAATTAAGAAAGGTTTGTACAATGCTATAATTA

Function

symbol description
ak3 Predicted to enable adenylate kinase activity and nucleoside triphosphate adenylate kinase activity. Acts upstream of or within myeloid cell development. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial matrix. Is expressed in blood; brain; notochord; tail bud; and yolk syncytial layer. Orthologous to human AK3 (adenylate kinase 3).

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process

KEGG:

id description
K00944 AK3; nucleoside-triphosphate--adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_05085761_05095609.mRNA True 1542 mRNA 0.43 6 5085596 5096251

Neighbor

gene id symbol gene type direction distance location
CI01000304_04989817_04997932 NA coding upstream 87664 4988362 ~ 4997932 (+)
CI01000304_04902333_04911640 LIN54 coding upstream 173818 4900215 ~ 4911778 (+)
CI01000304_04876496_04883240 NA coding upstream 201894 4876336 ~ 4883702 (+)
CI01000304_04866074_04866590 PLAC8.1 coding upstream 218526 4864986 ~ 4867070 (+)
CI01000304_04708075_04768393 ADAMTS6 coding upstream 317015 4707405 ~ 4768581 (+)
CI01000304_05122605_05137890 EXD3 coding downstream 26354 5122605 ~ 5138169 (+)
CI01000304_05149465_05165999 NA coding downstream 52446 5148697 ~ 5166172 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding downstream 77426 5173426 ~ 5176791 (+)
CI01000304_05277392_05292162 DBH coding downstream 180850 5277101 ~ 5292162 (+)
CI01000304_05394708_05400373 NA coding downstream 297601 5393852 ~ 5400616 (+)
G420600 NA non-coding upstream 7321 5067544 ~ 5078275 (+)
G420530 NA non-coding upstream 46934 5037371 ~ 5038662 (+)
G420747 NA non-coding upstream 48540 5036696 ~ 5037056 (+)
G420746 NA non-coding upstream 48976 5036395 ~ 5036620 (+)
G420544 NA non-coding upstream 142077 4940767 ~ 4943519 (+)
G420517 NA non-coding downstream 94353 5190604 ~ 5197784 (+)
G420538 NA non-coding downstream 106021 5202272 ~ 5206967 (+)
G420785 NA non-coding downstream 111059 5207310 ~ 5207655 (+)
G420786 NA non-coding downstream 111452 5207703 ~ 5207923 (+)
G420787 NA non-coding downstream 112523 5208774 ~ 5209519 (+)
G420445 NA other upstream 781764 4303336 ~ 4303832 (+)
G418981 NA other upstream 2991918 2092494 ~ 2093678 (+)
G418116 NA other upstream 4210347 872670 ~ 875249 (+)
G418059 NA other upstream 4521145 558092 ~ 564451 (+)
G417987 NA other upstream 4857743 226703 ~ 227853 (+)
G421162 NA other downstream 1144982 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 2256398 7352621 ~ 7354396 (+)
G421435 NA other downstream 2387890 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2882377 7979078 ~ 7980735 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002629 ak3 coding NC_007121.7 CM002894.2 11000894 ~ 11012000 (-)