CI01000304_05489571_05504308


Basic Information

Item Value
gene id CI01000304_05489571_05504308
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5489525 ~ 5508080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_05489571_05504308.mRNA
ATTTAAAAGCTGCTTGTCTATATTCTCCCTGTTTCATTTTCTCGAAATGAGCAGCACTAATGACTGTCTGGAGATCCGCAGAGACCTTGAGGTATCGGTCAAGATTTTTCACCTTGTGTTTTATAAACCTCAGCTCAATCGCATCCGAGACCTTCGCCAAATCAATCCAATCGATGCTAATTGTGTGAGAGTGATAACATTGGCAGGGAGCAATGAAGCCTCAGACTTGAAGAAAAGCCTACCCGTCTCCCTCTCTCGTACCATCTTCCCTCTTGCATCTGTTGCGGTGCAGCAGGCCAGATGTTGTCCTTGTCAAACTCAATATCAGATTTCCGTAGTTTTCCGTTGCAACAGCTGAGCTAAGTGGGTTACTGCCCTTCCCCATTAGTCTGAGTCTTAATTGATTTACCCATAATTCTTTCACCAAACATCTCACTTAATTTTCATGCTCAAATAATCCATAAGAGGGACATGGGAATAGGGAGATGAGTTTATCAAGCGTGAGACACTACGTCAAGCTCAGAGTTTCCTGGACAGTGGAGAGAAAATGTTAAGTTAGAGGATGTCAGAATAAGTGAGTTAAGCAGGTGGAGACACTTCTATGTTGATTAGTGAGATTATTTGAATATGCTTGTAGTGAACTTTGATTGGCTAGTAAATTCTAAAACTGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_05489571_05504308.mRNA False 674 mRNA 0.42 3 5489525 5504624

Neighbor

gene id symbol gene type direction distance location
CI01000304_05394708_05400373 NA coding upstream 88909 5393852 ~ 5400616 (+)
CI01000304_05277392_05292162 DBH coding upstream 197363 5277101 ~ 5292162 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding upstream 314000 5173426 ~ 5176791 (+)
CI01000304_05149465_05165999 NA coding upstream 323353 5148697 ~ 5166172 (+)
CI01000304_05122605_05137890 EXD3 coding upstream 351356 5122605 ~ 5138169 (+)
CI01000304_05541965_05547732 NA coding downstream 36914 5541538 ~ 5547877 (+)
CI01000304_05584729_05612753 STRBP coding downstream 80105 5584729 ~ 5612798 (+)
CI01000304_05828658_05832773 MORN5 coding downstream 324034 5828658 ~ 5832803 (+)
CI01000304_05880320_05907760 NA coding downstream 375531 5880155 ~ 5907760 (+)
CI01000304_05931192_05933816 NA coding downstream 426568 5931192 ~ 5933816 (+)
G420881 NA non-coding upstream 8369 5480874 ~ 5481156 (+)
G420879 NA non-coding upstream 10853 5478363 ~ 5478672 (+)
G420835 NA non-coding upstream 100199 5388650 ~ 5389326 (+)
G420824 NA non-coding upstream 194103 5294640 ~ 5295422 (+)
G420892 NA non-coding downstream 77976 5582600 ~ 5639159 (+)
G420888 NA non-coding downstream 185410 5690034 ~ 5759320 (+)
G421000 NA non-coding downstream 281080 5785704 ~ 5785928 (+)
G421006 NA non-coding downstream 312595 5817219 ~ 5817554 (+)
G421007 NA non-coding downstream 313404 5818028 ~ 5818258 (+)
G420445 NA other upstream 1185693 4303336 ~ 4303832 (+)
G418981 NA other upstream 3395847 2092494 ~ 2093678 (+)
G418116 NA other upstream 4614276 872670 ~ 875249 (+)
G418059 NA other upstream 4925074 558092 ~ 564451 (+)
G421162 NA other downstream 736609 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 1848025 7352621 ~ 7354396 (+)
G421435 NA other downstream 1979517 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2474004 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 2727370 8231293 ~ 8235655 (+)
G420886 NA non-coding upstream 9169 5489984 ~ 5490217 (+)

Expression


Co-expression Network