CI01000304_05541965_05547732


Basic Information

Item Value
gene id CI01000304_05541965_05547732
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5541538 ~ 5547877 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_05541965_05547732.mRNA
CAATATATGCACCCTTCAACAGTAAAATTCAGATGAACAAAGCCTTTAGGAATGGTTGGCATGACCAGTGTGTAATATGTTTCCATATACTCGTATGGCTGTCCAGGTCTATGAGCCTCGAGCTGGGATGGGCTTAGCTCTGTTTCTGCCGTGATACGACTGGCTGCCTCTCTGCAGTACCTTGGGAATTCTCTGACCCACTTTGCCTTTCGTTTGGAGTTATTTTTTACATATTAGAAGAATAAAACAATGGCAGGCCTCACAATTTCTTTGCTTTTACTTTTCCTCTTTCTTTCTTGCACCTTTGTCACTGTCTGTTTTGCACTGAATTTGAGGAGGTGGTGGTGAAAGGAGAATGGATCAAGGAGTAGTTAGTTTCCTAAAAAAAAACAAAAAACAAATAAAAAGTAACTCTGCTATGAGGAAGATGGGAGTCAAATGCTACTTTAAAGTGTTGGTATTTTGTCAGCCATCCTGCAACGTGACAAACATTGCTCCACGTGATGATTCAAGATTGCAGTGTAACTGGTCAGATGTACTGACAATAAGCTCACAGGAAGAGATCTGGCTCTTCGCTATAATAGCTTTGCTAAGCCATTGTCTGCGGGAGTCAGGACTAACAATCCTGCTTTGGCAGTGGAGAGTACTGCCTTATTGCTCAAACAGGGCTGGAACGCTCTGCGCGAGATCTCTGCAGGATGCGTCTGGTCTCATGGAAGGCGTTTGGAACCTGATGCAGTTGTCAGCTCTCTGAGGAGAACATCTGGATGTCTAAGGCTGGCACTGTTAATTAGGGCTCTCTGCAGTCAGTCACTCTGTTCACACTGATGTGCTGAAGCCTTTTAATGGATTTTCATGGTCATTTGAATTAACAGAAAAGAATCTGTTCAGTTAAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_05541965_05547732.mRNA True 899 mRNA 0.43 3 5541538 5547877

Neighbor

gene id symbol gene type direction distance location
CI01000304_05489571_05504308 NA coding upstream 36914 5489525 ~ 5508080 (+)
CI01000304_05394708_05400373 NA coding upstream 140922 5393852 ~ 5400616 (+)
CI01000304_05277392_05292162 DBH coding upstream 249376 5277101 ~ 5292162 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB coding upstream 366013 5173426 ~ 5176791 (+)
CI01000304_05149465_05165999 NA coding upstream 375366 5148697 ~ 5166172 (+)
CI01000304_05584729_05612753 STRBP coding downstream 36852 5584729 ~ 5612798 (+)
CI01000304_05828658_05832773 MORN5 coding downstream 280781 5828658 ~ 5832803 (+)
CI01000304_05880320_05907760 NA coding downstream 332278 5880155 ~ 5907760 (+)
CI01000304_05931192_05933816 NA coding downstream 383315 5931192 ~ 5933816 (+)
CI01000304_05934136_05935124 NA coding downstream 386259 5934136 ~ 5935787 (+)
G420886 NA non-coding upstream 51321 5489984 ~ 5490217 (+)
G420881 NA non-coding upstream 60382 5480874 ~ 5481156 (+)
G420879 NA non-coding upstream 62866 5478363 ~ 5478672 (+)
G420892 NA non-coding downstream 34723 5582600 ~ 5639159 (+)
G420888 NA non-coding downstream 142157 5690034 ~ 5759320 (+)
G421000 NA non-coding downstream 237827 5785704 ~ 5785928 (+)
G421006 NA non-coding downstream 269342 5817219 ~ 5817554 (+)
G421007 NA non-coding downstream 270151 5818028 ~ 5818258 (+)
G420445 NA other upstream 1237706 4303336 ~ 4303832 (+)
G418981 NA other upstream 3447860 2092494 ~ 2093678 (+)
G418116 NA other upstream 4666289 872670 ~ 875249 (+)
G418059 NA other upstream 4977087 558092 ~ 564451 (+)
G421162 NA other downstream 693356 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 1804772 7352621 ~ 7354396 (+)
G421435 NA other downstream 1936264 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2430751 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 2684117 8231293 ~ 8235655 (+)

Expression


Co-expression Network