CI01000304_05931192_05933816


Basic Information

Item Value
gene id CI01000304_05931192_05933816
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5931192 ~ 5933816 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_05931192_05933816.mRNA
GGTCCAGAGGAAAGTGCGCGTTTTCTGCTGGACGCAGCGGCTGCTAAGCGCTGGATTAGAAACGCGCTGAGCAGCATCATCACCTCTCGAGCCATACCTGCAGGAGCTGTGCTGGGTCCTTGTGCTGTAACACACACCTCCCTGAGTGACAGCATCGCGTTCATCGCCTGTAAGTGCTCGGACAGACGAGCTACTGCCTACGTGCTCCAGATCGACCCATCAGTGCCTAGCGAATATCTGCAGATGATTCAGTCGGCTAGGAACGCAGAGGAACAAAATCTAGAGGCATATATGAATAAAGGACATCTATGTTTCAGAGCCATAAAGGATATTCCTGAAAACACTGAGCTTTTAGCTTGGTATGGGAGAGATCTAGCCAAACTGCTTGGTCTCAGCAACGAGCAAAAGAACACAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_05931192_05933816.mRNA True 418 mRNA 0.50 2 5931192 5933816

Neighbor

gene id symbol gene type direction distance location
CI01000304_05880320_05907760 NA coding upstream 23432 5880155 ~ 5907760 (+)
CI01000304_05828658_05832773 MORN5 coding upstream 98389 5828658 ~ 5832803 (+)
CI01000304_05584729_05612753 STRBP coding upstream 318394 5584729 ~ 5612798 (+)
CI01000304_05541965_05547732 NA coding upstream 383315 5541538 ~ 5547877 (+)
CI01000304_05489571_05504308 NA coding upstream 426568 5489525 ~ 5508080 (+)
CI01000304_05934136_05935124 NA coding downstream 320 5934136 ~ 5935787 (+)
CI01000304_05965390_05976384 NA coding downstream 31405 5965221 ~ 5980978 (+)
CI01000304_06006140_06015169 ARL15, ARL15B coding downstream 72270 6006086 ~ 6015802 (+)
CI01000304_06052958_06060880 MOCS2 coding downstream 119142 6052958 ~ 6060933 (+)
CI01000304_06215366_06219149 GOLPH3 coding downstream 281279 6215095 ~ 6219740 (+)
G421015 NA non-coding upstream 42431 5838046 ~ 5888761 (+)
G420969 NA non-coding upstream 102914 5824182 ~ 5828278 (+)
G421009 NA non-coding upstream 109417 5821194 ~ 5821775 (+)
G421008 NA non-coding upstream 110746 5820050 ~ 5820446 (+)
G421007 NA non-coding upstream 112934 5818028 ~ 5818258 (+)
G420967 NA non-coding downstream 6877 5940693 ~ 5947780 (+)
G421043 NA non-coding downstream 24294 5958110 ~ 5958343 (+)
G421067 NA non-coding downstream 179529 6113345 ~ 6113593 (+)
G421068 NA non-coding downstream 182482 6116298 ~ 6116679 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 754401 5173426 ~ 5176791 (+)
G420445 NA other upstream 1627360 4303336 ~ 4303832 (+)
G418981 NA other upstream 3837514 2092494 ~ 2093678 (+)
G418116 NA other upstream 5055943 872670 ~ 875249 (+)
G418059 NA other upstream 5366741 558092 ~ 564451 (+)
G421162 NA other downstream 307417 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 1418833 7352621 ~ 7354396 (+)
G421435 NA other downstream 1550325 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2044812 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 2298178 8231293 ~ 8235655 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location