CI01000304_05934136_05935124


Basic Information

Item Value
gene id CI01000304_05934136_05935124
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 5934136 ~ 5935787 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_05934136_05935124.mRNA
GTTTCATTTGCTCTGAATGCAAACTAAGTTTTCTCTTTGAATTCCCTTTACTGGCACACCAGAGATTTTTCTGCATAAAGAAGCCTACATGTTTTTCGAAGAAACTCACCATCCCAGAAATTCATTCACTGAGTAGCAAACCAACCACAGACTTCCACAATTTAGCACGAGAGCTGGAGAATTGCAGGAAAAATCGACCCGAAGATGCAAAGAGCACTAAAAGAAGATATTCTCTTGAATCAGACACAGATGAGAGTGATGGCGAACCATCATCTTTTGACACCCATGGAGATGAAAAGATATCTGTGAAAAGATTTTGTGTTAATGGCGTGAATAGACCTTCCTGGTCATCTGCCAGCAAAAAGTCTTTCAGCAAGGGCCAAAATTCTCAGTGCAGCTCACTACAAAACAATGACAACTGCACGACAAACCCCAACAGGCAGGATTTGAAGCCTATTACAATAGCGACCAAGCCTGCGTTCACCACTAGAGGGTCGTATGACAAGGACAGGAAGAGCGCGTTCACACAACCTCCACGCATCACGCCCCATATCCCACTGCTGTCAGCCAGTCTTACCAATGACAACACCCCTAGCCGGACAGCTTTCCTCCCCAGCATTCTACCACTCAACTTCCAGAGCTCTGCTTTGCTATACAAGGACCTTCCCAAACAGTTGTCTCTTCTTCCCAGCACAAACCTCTGGCCCAAGACCTCCCGGCTGCAGCAACTGCACACTACTCCTTTGTTGTCGCTACTGCCTCCCTCTCTATCTTCTCTTGGTCTACCTATGCAGAACTGGTGTGCTAAATGTAATATTTCTTTCCATATGACATCAGACCTGGTGCAACACATGAGGTCCCACCACAAGAAGGCGATGTCAGATGAGAAGCAGCCGAGGCACAGGGAGGAGAGGCTGAAGTGTCCCATGTGTAACGAAGCTTTCAGAGAGCGTCATCACCTGTCACGTCACATGACCTCTCATATATAAGCTCATGCTAAAAAAAAATCTGTTTCTCCTACCTAAATAAGCATTTGAAAATTGCTTTGAAAAAGTTTTTAAATATTAAAAAAAAAAATGTATATTAAATGTCATTCTCAAATTTAAATGAATGGTCAATGCCAATGAATTTCAGTGAAAACATTAATTGGTACTTACCCAAGGGGATCACTCACTATACATTAAGATTTAGGTTTATAGACTGTATGCGCCAGAGAAACAAGCCTGCAGCCATCTTTAGAATTTTGTGTTTGAACCTCCGTTTTTGCGGTTGCTCTGTATATTTCTGGCATCGCTGTCGAAGAGTAATTAGCCGTTGAAGTGGATTTACTTATTGTAGAGTTAACGAAAGTTATCATGACCGTTGTAATTTCTGAAGCGGATGTCATAACAAATGTCAGTAGACTGGGAAAATTTTAAAACGAACGGTTCATTCATAAATCCGTAAGATCTTACTTTAATGCAGTGGGAATACAAACCGGAAGACAGAACACAACCAGGCGAAGCACGGAAAAGGGGCGGGGCTACATAAGGTCTTGTTATTAGATTTAATAGATTTTTTTTTTTTTAATTAAATAATACATGTTTGATACATTTTACAAAATGCTTATTTAGGTAAATGTGGCAAAATTGAGCGACTTTATTCGGTAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_05934136_05935124.mRNA True 1652 mRNA 0.41 1 5934136 5935787

Neighbor

gene id symbol gene type direction distance location
CI01000304_05931192_05933816 NA coding upstream 320 5931192 ~ 5933816 (+)
CI01000304_05880320_05907760 NA coding upstream 26376 5880155 ~ 5907760 (+)
CI01000304_05828658_05832773 MORN5 coding upstream 101333 5828658 ~ 5832803 (+)
CI01000304_05584729_05612753 STRBP coding upstream 321338 5584729 ~ 5612798 (+)
CI01000304_05541965_05547732 NA coding upstream 386259 5541538 ~ 5547877 (+)
CI01000304_05965390_05976384 NA coding downstream 29434 5965221 ~ 5980978 (+)
CI01000304_06006140_06015169 ARL15, ARL15B coding downstream 70299 6006086 ~ 6015802 (+)
CI01000304_06052958_06060880 MOCS2 coding downstream 117171 6052958 ~ 6060933 (+)
CI01000304_06215366_06219149 GOLPH3 coding downstream 279308 6215095 ~ 6219740 (+)
CI01000304_06315989_06316538 NA coding downstream 379646 6315433 ~ 6316538 (+)
G421015 NA non-coding upstream 45375 5838046 ~ 5888761 (+)
G420969 NA non-coding upstream 105858 5824182 ~ 5828278 (+)
G421009 NA non-coding upstream 112361 5821194 ~ 5821775 (+)
G421008 NA non-coding upstream 113690 5820050 ~ 5820446 (+)
G421007 NA non-coding upstream 115878 5818028 ~ 5818258 (+)
G420967 NA non-coding downstream 4906 5940693 ~ 5947780 (+)
G421043 NA non-coding downstream 22323 5958110 ~ 5958343 (+)
G421067 NA non-coding downstream 177558 6113345 ~ 6113593 (+)
G421068 NA non-coding downstream 180511 6116298 ~ 6116679 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 757345 5173426 ~ 5176791 (+)
G420445 NA other upstream 1630304 4303336 ~ 4303832 (+)
G418981 NA other upstream 3840458 2092494 ~ 2093678 (+)
G418116 NA other upstream 5058887 872670 ~ 875249 (+)
G418059 NA other upstream 5369685 558092 ~ 564451 (+)
G421162 NA other downstream 305446 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 1416862 7352621 ~ 7354396 (+)
G421435 NA other downstream 1548354 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 2042841 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 2296207 8231293 ~ 8235655 (+)

Expression


Co-expression Network