CI01000304_06234231_06236303


Basic Information

Item Value
gene id CI01000304_06234231_06236303
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6234205 ~ 6236409 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06234231_06236303.mRNA
AGCCTAAACAGTCTGAAACTAGAACAGCCTACAGCATTAACACAGTGTTATGATGTATGACATTAAGACATCAGAGATGACTGAAGTTATATATGATAATGTGATGATGACTGAGACTGTGGAAATGGACAGAGGAGAAAGAGTGGAGATGATGGTGGATATCTATGACAGTGCAGATACTGTGAGATGTCATGATCTGAGGACAAACACAGAGAGACATCAGCCACTTCAACACACAGGAAGTGTTTCAATGAAGAACAGAAAGCACAAAGCAGTTGAAGTGTGTTTGTGTCTGCTGTGTGTTCTTCTGCTGACTGCTGTAATGGTGCTCTGTGTGTATTTCACCACCGAGAGAAACCAGTTACTAACCCACATCAATAACCTGACTGAGGAAAGAAAACAGATATTTACCAAATATGAGCAGATATTGAACCACAGCAATAATCTGACTGCAGAAAGCAAGCAGATAGAAAACAAGATTGATGAACTCCAACATCAGCGTGCTGACAACTTTAAATGGATTTACTACAACTTCAGTTTTTATTATATTTCATCTGAGGAGAAGTCATGGAGTGACAGCAGACAATACTGTCAACAGAGAGGAGCAGATCTAGTGATCATAAACAGCCAAAAGGAACGAGAGTTTTTGAAGAAGGTTGTTGATAATAATTCTTTTTGGATTGGTCTGAGAAGGACAAAGGGAGTGTGGAAATGGATTGATGGCACCACAATAAATGGGTACTGGAGTCCTCAGTACCAGTATCCATATAGTGTATATGACTGTGGTCTAATGACTCCATCAGGTTGGGAAGATTGGTCATGTAATGGTTATTCTGAAAAATGGATCTGCGAGAGAACAATTTTAAAATCACTCATTACATAAAATATATGTACATACAGTGAAATAAA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06234231_06236303.mRNA True 909 mRNA 0.39 5 6234205 6236409

Neighbor

gene id symbol gene type direction distance location
CI01000304_06222605_06223109 NA coding downstream 9931 6221146 ~ 6224274 (-)
CI01000304_06204719_06212827 NA coding downstream 21029 6204106 ~ 6213176 (-)
CI01000304_06123328_06162242 ITGA1 coding downstream 71963 6120800 ~ 6162242 (-)
CI01000304_06092291_06110594 ITGA2 coding downstream 123561 6091994 ~ 6110644 (-)
CI01000304_06063226_06079147 ITGA2.2 coding downstream 155058 6063226 ~ 6079147 (-)
CI01000304_06240590_06242902 APLNRB coding upstream 4057 6240466 ~ 6243012 (-)
CI01000304_06270879_06289706 TBC1D10AB coding upstream 32784 6267565 ~ 6290510 (-)
CI01000304_06300308_06314871 PPTC7A, PPTC7B, PPTC7.S, PPTC7 coding upstream 62296 6298705 ~ 6315061 (-)
CI01000304_06324113_06327228 HVCN1 coding upstream 87682 6324091 ~ 6328179 (-)
CI01000304_06395132_06433884 SKIV2L2 coding upstream 158626 6395035 ~ 6433884 (-)
G422232 NA non-coding downstream 2738 6231222 ~ 6231467 (-)
G422231 NA non-coding downstream 3037 6230942 ~ 6231168 (-)
G422229 NA non-coding downstream 5308 6228540 ~ 6228897 (-)
G422228 NA non-coding downstream 5946 6227989 ~ 6228259 (-)
G422227 NA non-coding downstream 6378 6227526 ~ 6227827 (-)
G422240 NA non-coding upstream 27353 6263762 ~ 6264045 (-)
G422246 NA non-coding upstream 88050 6324459 ~ 6324994 (-)
G422256 NA non-coding upstream 211335 6447744 ~ 6448495 (-)
G422318 NA non-coding upstream 264310 6500719 ~ 6501031 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 1561258 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 1969004 4263846 ~ 4265201 (-)
G419354 NA other downstream 3967964 2262502 ~ 2266241 (-)
G419353 NA other downstream 3998099 2229384 ~ 2236106 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 241042 6480743 ~ 6483986 (-)
G422354 NA other upstream 394677 6631086 ~ 6631499 (-)
G422378 NA other upstream 508270 6744679 ~ 6783046 (-)
G422810 NA other upstream 1393750 7630159 ~ 7652703 (-)
G423386 NA other upstream 2625814 8862223 ~ 8865296 (-)

Expression


Co-expression Network