CI01000304_06315989_06316538



Basic Information


Item Value
gene id CI01000304_06315989_06316538
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6315433 ~ 6316538 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000304_06315989_06316538.mRNA
TCATAAAATTAAACACTTTTGTATATTGCGCGCGCACACACAGAGTGCTGTCAAATCGATTAAACGCATCTAACAAAAGTTTGTAAATATATATGTAAATATATAATACACACAAAATTAGATGTGATTATTCGTGATTAATCGATTTGACAGCACTTATATTGTGTGTTTGACCCATGAATTAATTAAAATACATTTTACTGTATAGATATATTATTACTGATTATATATATATATAGAGAGAGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATAGTGTGTGTGTGTGTGTAATAGCTTGTAATAAAAATATTAAATATTTTTATATCAATAAAACATAAAACGTAATAATAAATATATATATATTATAAATTATAATTTACTGTTATGTATAGATGAACCACAGAAATCAGCCTGGTTTGGATTTTAATGGCATCTGCAGCTTCGAAGACTTTAGATTGGCCGCCTCGCAATCCCACAATGCATTTCATTTCCTAGATACCAATGACAACGCGCTGTAACCAAGCATGGCGGTGTTGCGTTGTCTTATTATTCTGACATATTTGGAAACCGCGCTCTGCATTGAAGACACGAACACTACAGGAAACATTAATGTAACACTCAGAGACACTAACGACACGTCTTCTGATCGAGATGAATCGCTTAATTTCACGGAGCCGGGAGACAGTTCTACTCCGTCTAATTTTCCCCCTCCAACAGCCTGGACGCCCGAATCAGTGACCGTATTCCCCGAACAGACCGAGTCTTCGGAGAGCTTCATCCCCAACGCGACCCCCGAATCCCCGCGAGCCGCCGCAACAGCACCGCCTCTGCTCGTGTCCGGTGCCCTCCCTGCCCCGCTTACCGATGTCGTTAAGCTGTGTCCGTGCAACCTGCAGAATGAGCAGTGCGACATAAACTGCTGCTGTGATCCAGACTGTACAGAGGAACTGTCTCTCTTCACTGACTGCTCAGTAGACAGAGTCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000304_06315989_06316538.mRNA True 1017 mRNA 0.39 2 6315433 6316538

Neighbor


gene id symbol gene type direction distance location
CI01000304_06215366_06219149 GOLPH3 coding upstream 95693 6215095 ~ 6219740 (+)
CI01000304_06052958_06060880 MOCS2 coding upstream 254500 6052958 ~ 6060933 (+)
CI01000304_06006140_06015169 ARL15, ARL15B coding upstream 299631 6006086 ~ 6015802 (+)
CI01000304_05965390_05976384 NA coding upstream 338293 5965221 ~ 5980978 (+)
CI01000304_05934136_05935124 NA coding upstream 379646 5934136 ~ 5935787 (+)
CI01000304_06317696_06323233 NA coding downstream 1158 6317696 ~ 6323827 (+)
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding downstream 14678 6331216 ~ 6373208 (+)
CI01000304_06384004_06392366 NA coding downstream 67466 6384004 ~ 6392743 (+)
CI01000304_06434499_06453808 DHX29 coding downstream 117961 6434499 ~ 6453906 (+)
CI01000304_06496953_06504096 NA coding downstream 179952 6496490 ~ 6504793 (+)
G421131 NA non-coding upstream 5773 6304075 ~ 6309660 (+)
G421184 NA non-coding upstream 19608 6295460 ~ 6295825 (+)
G421182 NA non-coding upstream 21815 6293404 ~ 6293618 (+)
G421124 NA non-coding upstream 45674 6267568 ~ 6269759 (+)
G421156 NA non-coding upstream 83002 6232134 ~ 6232431 (+)
G421201 NA non-coding downstream 159691 6476229 ~ 6476435 (+)
G421202 NA non-coding downstream 160141 6476679 ~ 6476903 (+)
G421203 NA non-coding downstream 160616 6477154 ~ 6477391 (+)
G421204 NA non-coding downstream 179120 6495658 ~ 6495882 (+)
G421211 NA non-coding downstream 242944 6559482 ~ 6559828 (+)
G421162 NA other upstream 72436 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1138642 5173426 ~ 5176791 (+)
G420445 NA other upstream 2011601 4303336 ~ 4303832 (+)
G418981 NA other upstream 4221755 2092494 ~ 2093678 (+)
G418116 NA other upstream 5440184 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 1036111 7352621 ~ 7354396 (+)
G421435 NA other downstream 1167603 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1662090 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1915456 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2355232 8671770 ~ 8672555 (+)

Expression



Co-expression Network