CI01000304_06384004_06392366


Basic Information

Item Value
gene id CI01000304_06384004_06392366
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6384004 ~ 6392743 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06384004_06392366.mRNA
TTGGACTCCCATTCGCAATACTCACAATACAACACAAAACATTCAAACGAGGATTTTTCTGTAACGATGACTCTATCAACTACCCATATAAAGAAGACACCATTTCCTATCAGTTATTAGGAGGAGTAATGATTCCTATCACTGTGCTTACTATGATCATAGGGGAGTGCCTTTCAGTCTATCTAAACCGCATCAAATCAAAGTCTTTCTGCAACAGTTATGTGGCCTGTATCTATAAGGCCATTGGCACCTTTGTGTTTGGTGCCGCCATGAGCCAATCACTCACTGACATTGCCAAGTATTCCATTGGCCGGCTGCGGCCACACTTCCTGGATGTGTGCAAACCGGACTGGACGCAGATCAACTGCACAGGAGGGGCTTATATCGAGGACTTCGTCTGTACTGGGGACTCAACCAAGGTCAATGAGGGAAGTTGTCCACACAGTTGGCCACCCAGGCTCTTGGTGGAAATCTGTGGTTCACACGCTGTAGTGGTCTCTAATCCTGTGTGGTTATCTAGTGTTTGCCTAGGAGACGATGCCATTTATAGAACAAATAAAGAGCAGCATGGGTCTGAGCCCAGAATAACCCGGGTCAACTTTCACACGGCAGTGTTCTCCTCAGGAAAAAGGGATCTTCTCACTAGGCAAGCAAGTGTATTTGCTTGTAAAAGGCTTTATCTTCAAGCAAGAATGCAAGCTGAGTGGGCACGGCTCCTTCGACCCACGCTCCAGTTCTTCCTGATCGCCGCCTCCGTCTATACGGGACTGTCCCGTGTCTCAGACTACAAACACCACTGGAGTGATGTACTCACAGGCCTCATACAAGGAGCTATCGTGGCTTTACTAGTGGTTTTCTGTGTGTCGGATTTCTTCAAAAAGAAAGTTGAACCTCAGAAAGAGGCTGAGATCCCACATACTACCTTACAAGAAACACCTACAAATGGAAATCATTACGAGAACCCAAACTAAGCTATCAGGAACCTCTGACGATGGGAAGGGGTTTCAGCATGCACCCACTATGAGGGCAGACCACTAGGGTGGAAACCTGTGAATGTAACCTTGCTTTCTATGTTCTCCAGATACCCCTTTCTGGGGGTCTCTTTATGGACGCTGTCCCACGTTGCCTTGGCTGGACTGCTTCTGCTGCTACCACAGCTTCCTGTGTATCTCCAAAAACTAATAAGTGTACCTCTATTATGCCACAAAAGAAAAACCTTTTTTTATCTGTATGAAAAAAAGAATCACTATACAAACTTTTTTTTATTAAAATTGTTAAAACTGTATGTACAATATGTTGCGCTTTTATGATGAAAACAAGAACCCATTATGCTCGTTGACGAACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06384004_06392366.mRNA True 1348 mRNA 0.45 6 6384004 6392743

Neighbor

gene id symbol gene type direction distance location
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding upstream 10796 6331216 ~ 6373208 (+)
CI01000304_06317696_06323233 NA coding upstream 60177 6317696 ~ 6323827 (+)
CI01000304_06315989_06316538 NA coding upstream 67466 6315433 ~ 6316538 (+)
CI01000304_06215366_06219149 GOLPH3 coding upstream 164264 6215095 ~ 6219740 (+)
CI01000304_06052958_06060880 MOCS2 coding upstream 323071 6052958 ~ 6060933 (+)
CI01000304_06434499_06453808 DHX29 coding downstream 41756 6434499 ~ 6453906 (+)
CI01000304_06496953_06504096 NA coding downstream 103747 6496490 ~ 6504793 (+)
CI01000304_06523767_06526359 NA coding downstream 130962 6523705 ~ 6526427 (+)
CI01000304_06529800_06545548 ATP6V0A2A coding downstream 137057 6529800 ~ 6546501 (+)
CI01000304_06547442_06555032 NA coding downstream 154699 6547442 ~ 6555367 (+)
G421131 NA non-coding upstream 74344 6304075 ~ 6309660 (+)
G421184 NA non-coding upstream 88179 6295460 ~ 6295825 (+)
G421182 NA non-coding upstream 90386 6293404 ~ 6293618 (+)
G421124 NA non-coding upstream 114245 6267568 ~ 6269759 (+)
G421156 NA non-coding upstream 151573 6232134 ~ 6232431 (+)
G421201 NA non-coding downstream 83486 6476229 ~ 6476435 (+)
G421202 NA non-coding downstream 83936 6476679 ~ 6476903 (+)
G421203 NA non-coding downstream 84411 6477154 ~ 6477391 (+)
G421204 NA non-coding downstream 102915 6495658 ~ 6495882 (+)
G421211 NA non-coding downstream 166739 6559482 ~ 6559828 (+)
G421162 NA other upstream 141007 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1207213 5173426 ~ 5176791 (+)
G420445 NA other upstream 2080172 4303336 ~ 4303832 (+)
G418981 NA other upstream 4290326 2092494 ~ 2093678 (+)
G418116 NA other upstream 5508755 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 959906 7352621 ~ 7354396 (+)
G421435 NA other downstream 1091398 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1585885 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1839251 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2279027 8671770 ~ 8672555 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location