CI01000304_06473293_06476260


Basic Information

Item Value
gene id CI01000304_06473293_06476260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6473293 ~ 6476366 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06473293_06476260.mRNA
AACATCTTAAGTATTTAACACATTCATTCCTAAACTAGAGGGTTTTTTTTTAAGCAAATGCTGTATTCAGTTGTAGCAAATTTGTTTTCAGTACACCTCAAGCGCAATGAGCGATATGAACAGCAACTCCACAGTTCGGCCACTAGGTGGTGAAAAAAGTCCACGAAAAGTTGTGGAGTATTACTGCGCTGTGAAATCAGTCACTGCATTATTACATCCTGATATACGGAACTTAAGAGTCAGTTTCTGGAACACTGATATCACCAGCACAGCTGGATATGATAACATCATCCAGCACTTGAATGACGGTAAGAGGACGTGCAAGGAAATCGAGGACTTCATGAAAGCCAGAGCTGCAATAGAAGAGAAATATGCCAAGGAACTGCTGGGTTTGTCTAAGAAAGTGTGTGGACACAGTGAAATGAACACCCTGAAGCGATCACTTGACGTTTTCAAATTACAAACAGAGAATGTGAGTTTGTCTCATCTGCATTTGGCCCAAACCATGAGAGAGGAAGCCAAAAAATTAGAAGACTTCAGAGAGAAACAGAAAGAGGCCCGGAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06473293_06476260.mRNA True 568 mRNA 0.41 6 6473293 6476366

Neighbor

gene id symbol gene type direction distance location
CI01000304_06461313_06465520 NA coding downstream 7773 6460456 ~ 6465520 (-)
CI01000304_06395132_06433884 SKIV2L2 coding downstream 39409 6395035 ~ 6433884 (-)
CI01000304_06324113_06327228 HVCN1 coding downstream 145114 6324091 ~ 6328179 (-)
CI01000304_06300308_06314871 PPTC7A, PPTC7B, PPTC7.S, PPTC7 coding downstream 158232 6298705 ~ 6315061 (-)
CI01000304_06270879_06289706 TBC1D10AB coding downstream 182783 6267565 ~ 6290510 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 coding upstream 4377 6480743 ~ 6483986 (-)
CI01000304_06489010_06490993 NA coding upstream 11662 6488028 ~ 6492194 (-)
CI01000304_06507688_06509486 NA coding upstream 31176 6507542 ~ 6509622 (-)
CI01000304_06515961_06519125 NA coding upstream 39530 6515896 ~ 6519125 (-)
CI01000304_06659869_06667425 NA coding upstream 183458 6659824 ~ 6667499 (-)
G422256 NA non-coding downstream 24798 6447744 ~ 6448495 (-)
G422246 NA non-coding downstream 148299 6324459 ~ 6324994 (-)
G422240 NA non-coding downstream 209248 6263762 ~ 6264045 (-)
G422232 NA non-coding downstream 241826 6231222 ~ 6231467 (-)
G422318 NA non-coding upstream 24353 6500719 ~ 6501031 (-)
G422321 NA non-coding upstream 34625 6510991 ~ 6519445 (-)
G422331 NA non-coding upstream 83421 6559787 ~ 6560009 (-)
G422332 NA non-coding upstream 84120 6560486 ~ 6560717 (-)
G422343 NA non-coding upstream 135402 6611768 ~ 6612117 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 1800346 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2208092 4263846 ~ 4265201 (-)
G419354 NA other downstream 4207052 2262502 ~ 2266241 (-)
G419353 NA other downstream 4237187 2229384 ~ 2236106 (-)
G422354 NA other upstream 154720 6631086 ~ 6631499 (-)
G422378 NA other upstream 268313 6744679 ~ 6783046 (-)
G422810 NA other upstream 1153793 7630159 ~ 7652703 (-)
G423386 NA other upstream 2385857 8862223 ~ 8865296 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location