CI01000304_06496953_06504096


Basic Information

Item Value
gene id CI01000304_06496953_06504096
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6496490 ~ 6504793 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06496953_06504096.mRNA
ATATAAATACAAACATAACTGTTTGCTCATATAAATTTGATAGATTTTTTTTTTTTTTTTATCTGTCAATATTTGATAATGTCATCAGTTTAGTGGAGTAACATTGTTGGATAAAAGTAAACTGGAACTGTATCCATGCACATGCATGTGTGTTAGCAAAGTGCGCTAGCCGTTTCTAGCTATATGGCATGATGAATCAAATCCCGAAGCGGGCTGAAGTAAAACGCAGCAACAGGTAAGGATTTTAAACAGCACAACATTTTTCAAAGGATCATGTTTTTCTGAGCTTCTTTGCCAGGCAAAATACAGCAGCTACATAGAATAGATGCTAGCCTTTTTAAGTGAATGTCTGCCTTGTGGAAGCATAATATGCCATTGTATTGTCAATGTGTTTGTTTTTAACTGTCACGGGACCCTTCATTTACTGTTTAACCCCTTTCTTTCAGGCTGCATCAAAGAAACCATGACAGTCATTTCAGCTGATATAGCTGGTGTAATGCTTGGGGAAAAGGCCAGAAAAACAGTACAGATGATGCCATCATCAGACAACACCGTTTCACGTCGCATCGCTGATAAGGCAGAAGACGTTTTAAAACAACCATTGCTTCGCATAAAAGCCAGCGAATTCTACGCTTTACAAATTGATGAATCAGCAGACACTGCTGGTTTAGCTCAACTGCTGGTATATGTCCGGTACATTTACGAAGATCTATATGAGGAAAGGCCCATGGAAAGTCCACTGTCTCTTTTCAGTTATCAGAAAATCATAATTTCACATGAAGCTTTTAGTTGAACTCACTGGTGTGACCTACTTTATTGTTAGAGATTTTAAAAAACTAGAATACAAATGGATTACACTACTTAATTTAGTGAGTATACCATGACTGACAACATGTGGTTTGACACCTTGCAGCAGCCATTTTCATCAAAATTGTCACTGGTGTCTCCCATTTATATAGAAACTTTACTCAGAGCTATTCATTTAGTTCTTCTGCATAAAATATCACTAAGATTACGTAATTATAACTTTTCTTTCTTGTGGTTAATCCTCCTTTGGTCAGGTGTGGCTAAATTGAGTTCAGCTGAGAAGCAGCGACTTTACAGAGTATTTTACAGACATTTTTAAAATGTTATGATCTTTTACTGACTGCTTTCACTAAGTGTCATAAAGTCAAAGGGTAATCTAATAATGTGGTCTAAATTTAAATATTAGAAAGAGAAATACATTTTCAGACATCTTGCCATACCAAAAGTGGATGTTTCTGTAGAATGACCCAGTTGCGCCCTGGGTACAGTGCAGCATCCACAGAGAGGCGTTGGCCACCAAGGGAATGCCAGGCCGTTTAAAGGATGTTTTTTCCCATCTGAATGAGCTGAACCTCGGATTACAAGGAATGTCCACAACCATTTTCAACGCGCAAGACAAAGTCGAGGCCATGATCAGGAAGTTTCACGACTGTGAAAAGTTTGGGAACCACTGTTATATATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06496953_06504096.mRNA True 1490 mRNA 0.38 3 6496490 6504793

Neighbor

gene id symbol gene type direction distance location
CI01000304_06434499_06453808 DHX29 coding upstream 42584 6434499 ~ 6453906 (+)
CI01000304_06384004_06392366 NA coding upstream 103747 6384004 ~ 6392743 (+)
CI01000304_06331541_06373056 CSGALNACT1A, CSGALNACT1 coding upstream 123282 6331216 ~ 6373208 (+)
CI01000304_06317696_06323233 NA coding upstream 172663 6317696 ~ 6323827 (+)
CI01000304_06315989_06316538 NA coding upstream 179952 6315433 ~ 6316538 (+)
CI01000304_06523767_06526359 NA coding downstream 18912 6523705 ~ 6526427 (+)
CI01000304_06529800_06545548 ATP6V0A2A coding downstream 25007 6529800 ~ 6546501 (+)
CI01000304_06547442_06555032 NA coding downstream 42649 6547442 ~ 6555367 (+)
CI01000304_06556398_06582069 OSBP2 coding downstream 51312 6556105 ~ 6583204 (+)
CI01000304_06588229_06592354 SLC35E4 coding downstream 80707 6585500 ~ 6592363 (+)
G421204 NA non-coding upstream 608 6495658 ~ 6495882 (+)
G421203 NA non-coding upstream 19099 6477154 ~ 6477391 (+)
G421202 NA non-coding upstream 19587 6476679 ~ 6476903 (+)
G421201 NA non-coding upstream 20055 6476229 ~ 6476435 (+)
G421131 NA non-coding upstream 186830 6304075 ~ 6309660 (+)
G421211 NA non-coding downstream 54689 6559482 ~ 6559828 (+)
G421217 NA non-coding downstream 68751 6573544 ~ 6574011 (+)
G421122 NA non-coding downstream 125795 6630588 ~ 6630875 (+)
G421121 NA non-coding downstream 126271 6631064 ~ 6631497 (+)
G421227 NA non-coding downstream 175110 6679903 ~ 6680219 (+)
G421162 NA other upstream 253493 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1319699 5173426 ~ 5176791 (+)
G420445 NA other upstream 2192658 4303336 ~ 4303832 (+)
G418981 NA other upstream 4402812 2092494 ~ 2093678 (+)
G418116 NA other upstream 5621241 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 847856 7352621 ~ 7354396 (+)
G421435 NA other downstream 979348 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1473835 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1727201 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 2166977 8671770 ~ 8672555 (+)

Expression


Co-expression Network