CI01000304_06507688_06509486


Basic Information

Item Value
gene id CI01000304_06507688_06509486
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6507542 ~ 6509622 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06507688_06509486.mRNA
AAACATTGCATGCAAGTTTCTGTATCTCAGAAGAGGAGAATCCACACTGAATCCACACTGTTCTTTTAATATTGATTGTTTTATCCTTACTCATATTGAACTCACTTATATAAATGATTTGGTTCTGAACAGAGCAATGAAGCTTTATCTTAGCATCCTGCTACTCTTCAGCTGCCAGTTCATTCACACTCTGGCTTTAAACTGTGAAATGATTTGTGGCACCCTGAAGCAGATAGACGCTGGGTCAGGATCAGTGGTTGGAGTGAACAATCAAAATGAGGTCTTCATCCTGATTAATAACGTCTTCACAAAGGTCTTTACGTCTCTAAAGCACTTCAGTGTTGGTCCTGCTGGTCAGTTCGGGGTGGATACAGCAAACAACATCTTCAAGGTGCGGGGTGGCAGCCTTGTGCAGATTGAAGGCCTTCTCAAACAGGTGGATGCTGGAGGAGATCAGAACACTGCAGGTGTCAACATGTATGATGACATATTCTGTTTAAATATGGATGCTAACAACAAATTGCCATCCAGCTCTGTTCCTTGGGTTCATATTGGTGGAAAGCTGAAGTATTACAGCTGTGGCCCGTACAGCTGTAATGCCTGTTCCGGGTCCAACTTTGTGAATATTCCTGGACTTCTGTCCATGATTGAAGTAGCAACTGACGGCAGTGTCTTTGGTGTCAACTCTCAAGGGGCCTTATTCCAAAGAACTGGCATCACTCAATCCAACCCCGCTGGCACAGACTGGATCTCGATGGTTGCCTGTCCCAATGGCCACAAGCACGTGAGCTTTGACCTGGGATTGCTGTGGGTCGTCTGTGTTGATGGCTCCATCCGTAAATGTACTTTATAGTCTGTCATGCATCACTGCAGCAACAGAGGAGCTCAATCATTAACAGAAACCTCAAAATAATCAGATATTATTAACAGAAAATTATAAAAGTTTGATTAATCTCAATCTTTCTTTTCTTCTCTTTTTCCTGCTGTTGAATCAATAAA

Function

NR:

description
LOC561528 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06507688_06509486.mRNA True 999 mRNA 0.43 5 6507542 6509622

Neighbor

gene id symbol gene type direction distance location
CI01000304_06489010_06490993 NA coding downstream 15348 6488028 ~ 6492194 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 coding downstream 23556 6480743 ~ 6483986 (-)
CI01000304_06473293_06476260 NA coding downstream 31176 6473293 ~ 6476366 (-)
CI01000304_06461313_06465520 NA coding downstream 42022 6460456 ~ 6465520 (-)
CI01000304_06395132_06433884 SKIV2L2 coding downstream 73658 6395035 ~ 6433884 (-)
CI01000304_06515961_06519125 NA coding upstream 6274 6515896 ~ 6519125 (-)
CI01000304_06659869_06667425 NA coding upstream 150202 6659824 ~ 6667499 (-)
CI01000304_06706476_06715064 GGCX coding upstream 196448 6706070 ~ 6715064 (-)
CI01000304_06725873_06727044 NA coding upstream 216077 6725699 ~ 6727044 (-)
CI01000304_06738434_06742551 STOML2.L, STOML2, STML2 coding upstream 228632 6738254 ~ 6742551 (-)
G422318 NA non-coding downstream 6511 6500719 ~ 6501031 (-)
G422256 NA non-coding downstream 59047 6447744 ~ 6448495 (-)
G422246 NA non-coding downstream 182548 6324459 ~ 6324994 (-)
CI01000304_06270879_06289706 TBC1D10AB non-coding downstream 237783 6267565 ~ 6290510 (-)
G422240 NA non-coding downstream 243497 6263762 ~ 6264045 (-)
G422321 NA non-coding upstream 1369 6510991 ~ 6519445 (-)
G422331 NA non-coding upstream 50165 6559787 ~ 6560009 (-)
G422332 NA non-coding upstream 50864 6560486 ~ 6560717 (-)
G422343 NA non-coding upstream 102146 6611768 ~ 6612117 (-)
G422353 NA non-coding upstream 120956 6630578 ~ 6630875 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 1834595 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2242341 4263846 ~ 4265201 (-)
G419354 NA other downstream 4241301 2262502 ~ 2266241 (-)
G419353 NA other downstream 4271436 2229384 ~ 2236106 (-)
G422354 NA other upstream 121464 6631086 ~ 6631499 (-)
G422378 NA other upstream 235057 6744679 ~ 6783046 (-)
G422810 NA other upstream 1120537 7630159 ~ 7652703 (-)
G423386 NA other upstream 2352601 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 3058734 9566730 ~ 9575706 (-)

Expression


Co-expression Network