Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000304_06515961_06519125 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6515896 ~ 6519125 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Pol polyprotein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000304_06515961_06519125.mRNA | True | 1615 | mRNA | 0.46 | 4 | 6515896 | 6519125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06507688_06509486 | NA | coding | downstream | 6274 | 6507542 ~ 6509622 (-) |
| CI01000304_06489010_06490993 | NA | coding | downstream | 23702 | 6488028 ~ 6492194 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | coding | downstream | 31910 | 6480743 ~ 6483986 (-) |
| CI01000304_06473293_06476260 | NA | coding | downstream | 39530 | 6473293 ~ 6476366 (-) |
| CI01000304_06461313_06465520 | NA | coding | downstream | 50376 | 6460456 ~ 6465520 (-) |
| CI01000304_06659869_06667425 | NA | coding | upstream | 140699 | 6659824 ~ 6667499 (-) |
| CI01000304_06706476_06715064 | GGCX | coding | upstream | 186945 | 6706070 ~ 6715064 (-) |
| CI01000304_06725873_06727044 | NA | coding | upstream | 206574 | 6725699 ~ 6727044 (-) |
| CI01000304_06738434_06742551 | STOML2.L, STOML2, STML2 | coding | upstream | 219129 | 6738254 ~ 6742551 (-) |
| CI01000304_06867535_06870134 | NA | coding | upstream | 347992 | 6867117 ~ 6870134 (-) |
| G422318 | NA | non-coding | downstream | 14865 | 6500719 ~ 6501031 (-) |
| G422256 | NA | non-coding | downstream | 67401 | 6447744 ~ 6448495 (-) |
| G422246 | NA | non-coding | downstream | 190902 | 6324459 ~ 6324994 (-) |
| CI01000304_06270879_06289706 | TBC1D10AB | non-coding | downstream | 246137 | 6267565 ~ 6290510 (-) |
| G422240 | NA | non-coding | downstream | 251851 | 6263762 ~ 6264045 (-) |
| G422331 | NA | non-coding | upstream | 40662 | 6559787 ~ 6560009 (-) |
| G422332 | NA | non-coding | upstream | 41361 | 6560486 ~ 6560717 (-) |
| G422343 | NA | non-coding | upstream | 92643 | 6611768 ~ 6612117 (-) |
| G422353 | NA | non-coding | upstream | 111453 | 6630578 ~ 6630875 (-) |
| G422355 | NA | non-coding | upstream | 112526 | 6631651 ~ 6633786 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | downstream | 1842949 | 4661766 ~ 4672947 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 2250695 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 4249655 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 4279790 | 2229384 ~ 2236106 (-) |
| G422354 | NA | other | upstream | 111961 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 225554 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 1111034 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 2343098 | 8862223 ~ 8865296 (-) |
| CI01000304_09566730_09575706 | NA | other | upstream | 3049231 | 9566730 ~ 9575706 (-) |
