Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000304_06844730_06857162 |
| gene name | ATP8B5B |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 6843662 ~ 6857233 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| atp8b5b | Predicted to enable ATP binding activity; ATPase-coupled intramembrane lipid transporter activity; and magnesium ion binding activity. Predicted to act upstream of or within phospholipid transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ATP8B5P (ATPase phospholipid transporting 8B5, pseudogene). |
| id | name | namespace |
|---|---|---|
| GO:0005794 | Golgi apparatus | cellular_component |
| id | description |
|---|---|
| K01530 | E7.6.2.1; phospholipid-translocating ATPase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000304_06844730_06857162.mRNA | True | 4757 | mRNA | 0.44 | 27 | 6843662 | 6857233 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_06804498_06839363 | UNC13BB, UNC13B | coding | upstream | 3919 | 6803920 ~ 6839743 (+) |
| CI01000304_06772878_06775497 | NA | coding | upstream | 67898 | 6772878 ~ 6775764 (+) |
| CI01000304_06729746_06735139 | PCYOX1 | coding | upstream | 108401 | 6729645 ~ 6735261 (+) |
| CI01000304_06716920_06724565 | GMCL1 | coding | upstream | 118506 | 6716920 ~ 6725156 (+) |
| CI01000304_06698472_06702006 | SNX24 | coding | upstream | 140860 | 6698472 ~ 6702802 (+) |
| CI01000304_06864719_06866382 | NA | coding | downstream | 7486 | 6864719 ~ 6866445 (+) |
| CI01000304_06875225_06878962 | NA | coding | downstream | 16467 | 6873700 ~ 6879308 (+) |
| CI01000304_06986969_07013827 | NA | coding | downstream | 129595 | 6986828 ~ 7015834 (+) |
| CI01000304_07024195_07048285 | SLC5A1, SGLT1 | coding | downstream | 166962 | 7024195 ~ 7048285 (+) |
| CI01000304_07154005_07160649 | SPPL3 | coding | downstream | 296772 | 7154005 ~ 7161125 (+) |
| G421232 | NA | non-coding | upstream | 61862 | 6772124 ~ 6781800 (+) |
| G421108 | NA | non-coding | upstream | 117605 | 6713612 ~ 6726057 (+) |
| G421133 | NA | non-coding | upstream | 157638 | 6684453 ~ 6686024 (+) |
| G421227 | NA | non-coding | upstream | 163443 | 6679903 ~ 6680219 (+) |
| G421121 | NA | non-coding | upstream | 212165 | 6631064 ~ 6631497 (+) |
| G421280 | NA | non-coding | downstream | 40677 | 6897910 ~ 6902295 (+) |
| G421260 | NA | non-coding | downstream | 56764 | 6913997 ~ 6925035 (+) |
| G421292 | NA | non-coding | downstream | 102255 | 6959488 ~ 6963143 (+) |
| G421297 | NA | non-coding | downstream | 114785 | 6972018 ~ 6972221 (+) |
| G421300 | NA | non-coding | downstream | 126316 | 6983549 ~ 6983816 (+) |
| G421162 | NA | other | upstream | 600665 | 6241233 ~ 6242997 (+) |
| CI01000304_05173869_05175309 | NRARP, NRARP.L, NRARPA, NRARPB | other | upstream | 1666871 | 5173426 ~ 5176791 (+) |
| G420445 | NA | other | upstream | 2539830 | 4303336 ~ 4303832 (+) |
| G418981 | NA | other | upstream | 4749984 | 2092494 ~ 2093678 (+) |
| G418116 | NA | other | upstream | 5968413 | 872670 ~ 875249 (+) |
| CI01000304_07352697_07354032 | NA | other | downstream | 495416 | 7352621 ~ 7354396 (+) |
| G421435 | NA | other | downstream | 626908 | 7484141 ~ 7484688 (+) |
| CI01000304_07979388_07979919 | TMEM230, TMEM230A | other | downstream | 1121395 | 7979078 ~ 7980735 (+) |
| CI01000304_08232073_08235598 | NA | other | downstream | 1374761 | 8231293 ~ 8235655 (+) |
| CI01000304_08671901_08672203 | NA | other | downstream | 1814537 | 8671770 ~ 8672555 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
