CI01000304_06864719_06866382


Basic Information

Item Value
gene id CI01000304_06864719_06866382
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6864719 ~ 6866445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06864719_06866382.mRNA
GTATGTTGAAAGCTGTGAGTTTGGCAGTGGATCTAATAACAGCTCATTTCAACTCAAGACAAGACCCAGGGGAAAAGATCAGACTGGGAAACAGTTCACTGTGCACCACAATCAGCCACCTTGTCCTTAAACAGCTCTACCCCGCAATCCAGAACATTCTTCAAGATGGTTTGAAAGCATATAAATTGGATTTGATTATTGGAAAGCGACGCAACAAACTATGGAACATCGTAGAAGCCACGGCACAACCAGGCTCATCTACCCGACTGCCTGACAGCTTGGTATCTGTGGTAAAAAAATGTTCCGAGTTATCAAGTCGCATGCGGCTCAGTGCCTTCATCATAGATCTGCTAAACTTGCGTGCTATGGAATTCTGGATCCATCATTTATACACTTGCGTAGATGTTGTAACGGAACACTATCACCAATGGGGTTTCTTGGCTCTGGCCCAGGGGCCAATTTATGGACCACTGTTCCATGAGCTGCTTCTTTTGCTGCAGCCACTCTCCCTGGTGCCCTTTGACCTCCATCTGCCACCTGAACATAACCTTCAAAGTAGGGAAACTCAAAAGCACAGAGCACCTCTGCCTCATCGGCTTCTTGCCCAGTCAGCTCAGTTTCTTCAGATGAGCTCTATCCAGATGAACAGCAGAAGTTCAACATGTCACAGTGATGTTAGTAAAAGGGTAACTGATGGATTTGGAATCAATCAGACACCCACCTCAGAGAGTGGAACACAGAAGAAAGAATATGAAGGAAATGAAATGGAAAGTATTGAGATGCCACTATCTTCAACAAGTTCTCTGGAGGACAAACACTTCAGTGAGCTGCGTTGGGCCAGACTCTTTGGCTCTGGAGTTGGAACCCCAGTTGGGCCACAGAAGGCGCAAAAGAGCATTAGTGGATCTCCGAGAAGTAGGCGGCCCTCAGAATGGCTGAAGCTTGGTGCATCAAAAGTGGATCTGCTAGCACAGTCAGTGTGGACAAGGAAATGGCCAGAGGCTCATCTAAGTGTTAACCATGACAGAGAACAGCAAATAAAGATGAAATATTAACTCTTAAGAACCTACAAGGAGTCTGATTTCAGCTAGACAGAGTAGAAGCACAATTAATCCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06864719_06866382.mRNA True 1118 mRNA 0.46 6 6864719 6866445

Neighbor

gene id symbol gene type direction distance location
CI01000304_06844730_06857162 ATP8B5B coding upstream 7486 6843662 ~ 6857233 (+)
CI01000304_06804498_06839363 UNC13BB, UNC13B coding upstream 24976 6803920 ~ 6839743 (+)
CI01000304_06772878_06775497 NA coding upstream 88955 6772878 ~ 6775764 (+)
CI01000304_06729746_06735139 PCYOX1 coding upstream 129458 6729645 ~ 6735261 (+)
CI01000304_06716920_06724565 GMCL1 coding upstream 139563 6716920 ~ 6725156 (+)
CI01000304_06875225_06878962 NA coding downstream 7255 6873700 ~ 6879308 (+)
CI01000304_06986969_07013827 NA coding downstream 120383 6986828 ~ 7015834 (+)
CI01000304_07024195_07048285 SLC5A1, SGLT1 coding downstream 157750 7024195 ~ 7048285 (+)
CI01000304_07154005_07160649 SPPL3 coding downstream 287560 7154005 ~ 7161125 (+)
CI01000304_07236677_07272874 KCNN2 coding downstream 369700 7236145 ~ 7272960 (+)
G421232 NA non-coding upstream 82919 6772124 ~ 6781800 (+)
G421108 NA non-coding upstream 138662 6713612 ~ 6726057 (+)
G421133 NA non-coding upstream 178695 6684453 ~ 6686024 (+)
G421227 NA non-coding upstream 184500 6679903 ~ 6680219 (+)
G421121 NA non-coding upstream 233222 6631064 ~ 6631497 (+)
G421280 NA non-coding downstream 31465 6897910 ~ 6902295 (+)
G421260 NA non-coding downstream 47552 6913997 ~ 6925035 (+)
G421292 NA non-coding downstream 93043 6959488 ~ 6963143 (+)
G421297 NA non-coding downstream 105573 6972018 ~ 6972221 (+)
G421300 NA non-coding downstream 117104 6983549 ~ 6983816 (+)
G421162 NA other upstream 621722 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1687928 5173426 ~ 5176791 (+)
G420445 NA other upstream 2560887 4303336 ~ 4303832 (+)
G418981 NA other upstream 4771041 2092494 ~ 2093678 (+)
G418116 NA other upstream 5989470 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 486204 7352621 ~ 7354396 (+)
G421435 NA other downstream 617696 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 1112183 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1365549 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1805325 8671770 ~ 8672555 (+)

Expression


Co-expression Network