CI01000304_06986969_07013827


Basic Information

Item Value
gene id CI01000304_06986969_07013827
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 6986828 ~ 7015834 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_06986969_07013827.mRNA
ACATATAAGTGAAAGCGTGCACATGCACACACACACACGGTCACACACCTGCAGATGAACGTCTGAGCCAAGAATCTTTACCATTGTGTCAGAGAGGGACGCAGTGTGGTGCTCCTCTTGCCCTGCTTAAACAGCATCAAAATGGGGGCAGATTATGCTGGCTTCTCTTATCTCCGCAATGAGAATAGAAGAAATGTCACCGTTCATATTAACAATCCAGCGGACATCTCAGTGATTGTTGTATATTTTCTGGTGGTTCTAGCTGTGGGAATATGGGCAATGGTACGGACCAATCGAACCACAGTAGGAGGCTTTTTCCTGGCTGGCCGAAGTATGGTGTGGTGGCCGATTGGAGCCTCTGTCTTCGCAAGTAACATTGGAAGTGTGCATTTTGTGGGACTAGCAGGAAGTGGAGCAGCTGCTGGTATCGCCATCGGAGGCTTTGAGTGGAATGCTCTTGTTGTTGTGATTTTAATGGGATGGCTCTTCGTGCCCATCTACATAAAGGCTGGGGTCGTGACCATGCCGGAGTATTTGAAGAAACGCTTTGGTGGGCAGCGTATCCGTATCTACCTCTCCGTGCTGTCCCTGTTTCTCTACGTTTTCACCAAAATCTCCGTGATTGTGCAGCGCTGTCTGTCTGCCAAGAGCCTGTCTCATGTGAAAGCTGGCTGCATCCTGTGTGGTTATCTCAAACTTCTGCCCATGTTTATCATGGTTTTCCCTGGCATGATCAGCAGAGTGTTGTATACAGAAAATCAAAATCTTGCTGTTCATTTTTATCTATTGACACATAATGTTGATATTCCCTCACAGGGCGCTTTCTACGGGTTGTGTATTGGTCTGTTGCTGTACAGACTCTGCTGGAGTTTGAGGAACAGCACTGAGGAGAGGATAGATCTAGAGTTAGATGACTGGACTGATGAACAGGATTCCAGCTCTATGGAAAAAGAAGAGATGCGTGAGGAACCAGGCTTTTGTAAGAAGGCCTACAACTGGTTCTGTGGCTTTGATCAAGGCAATGACTCTAAACTGACTAAAGAACAGGAGGCGGAGATGAAGATGAAGCTCACCAACACCACTGAGAAACCTCTATGGAGAAACGTGGTCAACGCTAACGCTATTATCCTACTCGCTGTCTGCGTCTTTTTCCATGGTTTCTTTGGTTAAAGATCACACCAGTAGCATCTAACTCAGTTAATGATATTTGGGGGGGGGGAGATATTGTAAAAAAAAAAAAACCATCAAATTTTGGCAATGTTAAGAGGATTTGATATTTCCAATTAATGTAGTCCTGTTACATTATTCTAGTCTATTATTAGGTTACTTTAATAAATGAATATTATAATAAATTTGCCACAATAATTTGCAACACCGCATAACAGACATGCTGTGAAGATAATAAAATATTAGGATATTAGCTCTTCTTTGAAAATATCTTATTTTTATTTATTTTTTAGGTCTATTATACAATTAATTATATAATTAATTATATTACATGTAAATTAAAATTATTAACAGTCTATATTCCTAACAATGCAGTCATCAATGAAAATTAAGAGCAGATTTACTTAAAGCACCGACTTCACCGACAACCTGTTTAACACGAAATACTATTCTTCTCACTTGTTTCACTATATGTATGGGCCACAAGAGAAATAATGGAATAAATTAAGATCGACTTTCTGTAGTGAATACTGACTGAGGTTAAGACTCTTTCACCGGCATAACTCTTGCGCAAAGTTTGCACATTGCTTGTGTGATATCCATTGGCTCGCCGCCTTGGTTTAAAACGGAAAGATTTCCAAGGGGGCCCCGCGGATTTGCGCTACGCCACTGAGAAAGGCTTATAGTTCATCATAATAAAGTTATATACATCATACACACGCTATATTGCCAAATCTACCTGATTTTTTATATCAACAGAAAAATATACCAGGATATACTAGAGACTCTCCTGCTTCAGATCGTCATGGTTAATGATATGCTATAGCCCGCCGGTATTTTGACGTGATTGGTTACAGGGTAGTTTGTGATGTCAGAAACACCAGCAATTTCAAACCGCGGGTTTAGACTGTCTTTTTTTCACTACAGTTTTAAATAGAACATTCTCATGTAGCAAATTAGCTCAAAGAAATATGAATAATTAATCATAACTAGTTATAATTAATTATAAATATTTGGAATAAAATAAAATTAACTTAATGTAATAAAATTAATATTACAATCAATTAACCTGTTTGGCCAATGAACACTCAGTGTTAATTGTTTATTAATTCTAAGAAATGTTCATTTCCAGGTTATGGGAAATAACATTCTTATTGTACTGTACTACTCAGAGCATGTAGTCAGGATCTGCATGATTAGGGACTCCAGTATATGAGCATGAAACACAGACAACTTTACGTGTGACATGAACAAGACTTTATTAACTAGACTAAACACTTAAACTACTCTAACATTCACACACATACATGCATACAGTTTACCAAGGGAAAGAGAGAGATGAAGCAGAATACAGGAAAGCAAGAAGTTACAGCATCGTTTGAAACTCAGCAGATCAACAGCCTTGAGCAAACAATCAGTTTGGTTCTAACATGCCCTTCTTTAAAGGGGGTAAGGATACTTAATGTATCAAATAATGAGACTAAGTTTGATAGTTGCATGCAGGGCTCTGAACCGGTTCAAGGAACGAAAACGAAAACCGGAACTGAACAAAATTTTGACCGGAACGTAACCAGAAACGGAAACGAAATCAAATTTAATCTAATTTGAAATGGCCATTAACCGGTTAATAACGTTATTTTATCGTTCTGTTTAATATTTTGATTTGGCAGTCAACCAATCACGAAGTCAAATAGTACAGCCTATGCAAATGTGACGCTGACGCATCCAAAGTGTGTGAAATGCCCGCGCTCAGGCTCAGCTGTCAAGTCCGTTAGATAAGTCACAATGGCAATGCCCTGGCATTATTTTTTCCGATGATGTCACCAACCGTCAAGCATTAGGCCTACATTTAAGTGAAAATGAATGTCAAGTAATATGCAGCTTCTTGTGTGTTTTGAAACCAGCCAAAATTGCAGATGTAGAACACGAGTTCACACAACGTCACATCACGCACCTGCAGTGCTTCTGTGAATGGAGAAAACAGAATAAAACTATAGGCTACATAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_06986969_07013827.mRNA True 3177 mRNA 0.39 9 6986828 7015834

Neighbor

gene id symbol gene type direction distance location
CI01000304_06875225_06878962 NA coding upstream 107520 6873700 ~ 6879308 (+)
CI01000304_06864719_06866382 NA coding upstream 120383 6864719 ~ 6866445 (+)
CI01000304_06844730_06857162 ATP8B5B coding upstream 129595 6843662 ~ 6857233 (+)
CI01000304_06804498_06839363 UNC13BB, UNC13B coding upstream 147085 6803920 ~ 6839743 (+)
CI01000304_06772878_06775497 NA coding upstream 211064 6772878 ~ 6775764 (+)
CI01000304_07024195_07048285 SLC5A1, SGLT1 coding downstream 8361 7024195 ~ 7048285 (+)
CI01000304_07154005_07160649 SPPL3 coding downstream 138171 7154005 ~ 7161125 (+)
CI01000304_07236677_07272874 KCNN2 coding downstream 220311 7236145 ~ 7272960 (+)
CI01000304_07288867_07299197 DRG1, DRG1.L coding downstream 273033 7288867 ~ 7299754 (+)
CI01000304_07314354_07323703 SLC20A1.L, SLC20A1.S, SLC20A1B, SLC20A1 coding downstream 297863 7313697 ~ 7324618 (+)
G421300 NA non-coding upstream 3012 6983549 ~ 6983816 (+)
G421297 NA non-coding upstream 14607 6972018 ~ 6972221 (+)
G421292 NA non-coding upstream 23685 6959488 ~ 6963143 (+)
G421260 NA non-coding upstream 61793 6913997 ~ 6925035 (+)
G421280 NA non-coding upstream 84533 6897910 ~ 6902295 (+)
G421310 NA non-coding downstream 64591 7080425 ~ 7097508 (+)
G421358 NA non-coding downstream 103976 7119810 ~ 7120041 (+)
G421362 NA non-coding downstream 110759 7126593 ~ 7126872 (+)
G421365 NA non-coding downstream 112659 7128493 ~ 7128732 (+)
G421311 NA non-coding downstream 159647 7175481 ~ 7177256 (+)
G421162 NA other upstream 743831 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 1810037 5173426 ~ 5176791 (+)
G420445 NA other upstream 2682996 4303336 ~ 4303832 (+)
G418981 NA other upstream 4893150 2092494 ~ 2093678 (+)
G418116 NA other upstream 6111579 872670 ~ 875249 (+)
CI01000304_07352697_07354032 NA other downstream 336815 7352621 ~ 7354396 (+)
G421435 NA other downstream 468307 7484141 ~ 7484688 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other downstream 962794 7979078 ~ 7980735 (+)
CI01000304_08232073_08235598 NA other downstream 1216160 8231293 ~ 8235655 (+)
CI01000304_08671901_08672203 NA other downstream 1655936 8671770 ~ 8672555 (+)

Expression


Co-expression Network