CI01000304_07051182_07056250


Basic Information

Item Value
gene id CI01000304_07051182_07056250
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7051128 ~ 7056250 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_07051182_07056250.mRNA
GCGAGTTTCCCTAGACAACCTGCTGACAAGAAAATGCATTTCAGCCCTCCTGTCAGCAGAGACAGGATCATATCTACATTTCCAAAGTCTGCAGAAGAGTGTGAGAGAACAGAGAGGGATGCCATAAAGATTGCAGCAGAAATGAACGCTGAGTTCTGGTCGGTGTCCTCAAAAACAGGGGAGAATGTCCAGGAGTTTTTCTTTCGCGTGGCAGCTCTGGCCTTTGAGGATGCCATTCTGAAGGACTTGGAGACAGAAATCAGCACCGCTCAGATCGGAGATGGAAGTATTCTCAATGATAAAGCACTGGAAGATACACAAGAAAAACCAAAGAAGAAGTCCTGTTGTTGATCCTGGATCTTTCAAGAAGAAAAATGACCAATTTGTATTACAGAACAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_07051182_07056250.mRNA True 405 mRNA 0.44 4 7051128 7056250

Neighbor

gene id symbol gene type direction distance location
CI01000304_06935639_06967113 DEPDC5 coding downstream 82074 6935528 ~ 6969054 (-)
CI01000304_06931421_06933921 YWHAG.S, 143G2, 143G1, YWHAH, YWHAG.L, YWHAG2, YWHAG, YWHAG1 coding downstream 117069 6930738 ~ 6934059 (-)
CI01000304_06914589_06924928 SLC5A1, SGLT1 coding downstream 125976 6913830 ~ 6925152 (-)
CI01000304_06881372_06883185 RNF208 coding downstream 167943 6881054 ~ 6883185 (-)
CI01000304_06867535_06870134 NA coding downstream 180994 6867117 ~ 6870134 (-)
CI01000304_07065444_07081535 GNAZ coding upstream 8969 7065219 ~ 7081970 (-)
CI01000304_07183432_07198305 NT5C2L1 coding upstream 126372 7182622 ~ 7198305 (-)
CI01000304_07203008_07211715 NA coding upstream 146714 7202964 ~ 7211715 (-)
CI01000304_07212382_07216898 SKA1 coding upstream 155580 7211830 ~ 7216898 (-)
CI01000304_07218265_07232779 SMARCAD1B coding upstream 161970 7218220 ~ 7232779 (-)
G422439 NA non-coding downstream 22623 6986869 ~ 7028505 (-)
G422437 NA non-coding downstream 67185 6983695 ~ 6983943 (-)
G422436 NA non-coding downstream 67500 6982088 ~ 6983628 (-)
G422429 NA non-coding downstream 78897 6972031 ~ 6972231 (-)
G422420 NA non-coding downstream 80258 6907385 ~ 6970870 (-)
G422466 NA non-coding upstream 55905 7112155 ~ 7112374 (-)
G422468 NA non-coding upstream 63481 7119731 ~ 7120017 (-)
G422469 NA non-coding upstream 66001 7122251 ~ 7122511 (-)
G422473 NA non-coding upstream 71162 7127412 ~ 7128023 (-)
G422512 NA non-coding upstream 220749 7276999 ~ 7277246 (-)
G422378 NA other downstream 268082 6744679 ~ 6783046 (-)
G422354 NA other downstream 419629 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 567633 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 2378181 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 2785927 4263846 ~ 4265201 (-)
G422810 NA other upstream 573909 7630159 ~ 7652703 (-)
G423386 NA other upstream 1805973 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 2512106 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 2680496 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 3097196 10160458 ~ 10163762 (-)

Expression


Co-expression Network