CI01000304_07282197_07285838


Basic Information

Item Value
gene id CI01000304_07282197_07285838
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 7281481 ~ 7285838 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_07282197_07285838.mRNA
GACAAAAACAAGAAAACAAATTATACGAAGCAGACATTTCACTATCAACAATCATTTTCATCCGACGTTCACCTGACTGTTCTCCAAAAATGAACATCACAAAACCATATGGATTCAGCAGTTACTCTTTCCCTGAGCATGTGATGCCAGTGGAATTGGCCATGCATGCGCAGGTTAGCCCACCGGTGTCTCAGCTCCTTGGCATGTCCGCTCTCAGGTCCTCTTCATCCAACATATCCTCACCGGAGCTTCAAAGACCAAGATTTTCACCTCCTTCCCCATCATCTTCACGGTCTTCCTCCAGTTCTAGCAGCTCCCTGTCCTCATACTCTCCTGGCCGCGGCACACTACGCAAGAAGCAAGTTGTATTTGCTGATGCTAAAGGTCTCGCTCTTGCAACCGTGCGCATCTTCACCGCCGACCCTTTGGAGACGGAAACTGAAGATGCCCCACAACCAGAGGACAGCGTGAAGGCTAGAGCACCCATGCAGAGTGCGAGACTGCGACTGAAGCTTGGTTTTCCACAGCCTATTGCAGACCGTGCAAGCTTGAAGGAAACCTTAGTGCAGTTGGAGAGCTGTAGCTTGACCGAAAGGGTGTTGAGCGGAACTGTACGGGTCTGCAACATTAAGTTCGACAAGACTGTCGTTGTCCACATAACTTTTGACTCATGGCGAAGCCACAAAGAAATTGCATGCACTTATGTGAGGGAACCACATGCAACTTTGGAGACCGACTTGTTTGCTTTTAATGTGTCTCTACCATCTGAGCTGGACCCAAAGGAGCACGTAGAATTCTTAATGGTGTTCCGACCCGGCAATAGCCATTTGAAACTTGTAGACAATAACAAAGGTAAAAACTACCAGATTTATGTGGAAAACGTGGCACCGGAACCTCAGCTAATGACGCCAAGCAGGTGGAACTTTGTGGAAAACGTGGCACCAGAACCTCAGCTAGTGACGCCAAGCAGGTGGAACTTTGTGGAAAACGTGGCACCGGAACCTCAGCTAGTGACACCAAGCAGGCAGAACTTTGTGGAAAACGTGGCACCAGAACCTTGGCTAGTGACACCAAGCAGGCGGAACTTTGTGGAAAACAAGATGAAAAACTTGCCATGCAAAGGCCCACATTACCCGGACCGTCTGGTACTCAGGACCTGGGGAAGAATGGCAAATGTTGCTCCGTTGAGTTAAGATGGGACTGAGACACATGTGCCGTCCACATTTCTACTTGATCTCTATTAGATTTAATTGCGGATTCAACGAAGTGCAAAAATGACTTTTTGCACCCCAGTGTTGTACATATCCCTTACTTGAATGGACTATCTTGTTCAGTGCTTGCTAGTTTGCACATGCTGCTGAAGTGAAATGTGAATGTTTACTATGATACTTTTATATAAGTTTGAATTGGTTTTAATTTGCACATTACACTTAATAATACAATAGAAGTTTCACGGGACTCTCTCCCTATTGTCACCTGCCTTTCCTGTGTCTGAAGAGGTAAATTGATATGTAAAGGTGAAGCATAAAATAATCCTTTGTATATATGTATATATAATTATGTATTTATTTTGAAGTCTCTCATTAAAAAGAAACTGCTTTCCATGAACTTTTGCATGAGGTTTTTTTTTGTTGCATGATTTATCTTATACTGCAGGAAAAAAAAAACTGCAGGAACTGTCAAAACAAAAAGAGCTATTTAATTCTTTTGTGTGTAAAATGCGAAGGCTGTTGGATCATCAGAAATCATAAGGAGTGACTGAAACTTGTTTGATGGGAACTTAGAGCTCTTGGTTGCACAACCATATGCAAGATCCACCTAAACTACTGCTTCACCCTATTATGATGTTATGAAACAAGAATGTACACACCCCTACTGAAGTCAAAGCTTTTGTTTTGTTGTAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_07282197_07285838.mRNA True 1909 mRNA 0.43 4 7281481 7285838

Neighbor

gene id symbol gene type direction distance location
CI01000304_07218265_07232779 SMARCAD1B coding downstream 48702 7218220 ~ 7232779 (-)
CI01000304_07212382_07216898 SKA1 coding downstream 64583 7211830 ~ 7216898 (-)
CI01000304_07203008_07211715 NA coding downstream 69766 7202964 ~ 7211715 (-)
CI01000304_07183432_07198305 NT5C2L1 coding downstream 83176 7182622 ~ 7198305 (-)
CI01000304_07065444_07081535 GNAZ coding downstream 199511 7065219 ~ 7081970 (-)
CI01000304_07303509_07309222 STARD7 coding upstream 16986 7302824 ~ 7311711 (-)
CI01000304_07325899_07328203 NA coding upstream 39810 7325648 ~ 7328203 (-)
CI01000304_07464639_07466430 NA coding upstream 178397 7464235 ~ 7466430 (-)
CI01000304_07612069_07709665 NA coding upstream 326231 7612069 ~ 7709665 (-)
CI01000304_07961608_07968820 NA coding upstream 675727 7961565 ~ 7968949 (-)
G422512 NA non-coding downstream 4235 7276999 ~ 7277246 (-)
G422473 NA non-coding downstream 153458 7127412 ~ 7128023 (-)
G422469 NA non-coding downstream 158970 7122251 ~ 7122511 (-)
G422468 NA non-coding downstream 161464 7119731 ~ 7120017 (-)
G422466 NA non-coding downstream 169107 7112155 ~ 7112374 (-)
G422442 NA non-coding upstream 36185 7322023 ~ 7325559 (-)
G422521 NA non-coding upstream 53050 7338888 ~ 7340699 (-)
G422528 NA non-coding upstream 66826 7352664 ~ 7354386 (-)
G422536 NA non-coding upstream 82050 7367888 ~ 7368822 (-)
G422564 NA non-coding upstream 125518 7411356 ~ 7440582 (-)
G422378 NA other downstream 498435 6744679 ~ 6783046 (-)
G422354 NA other downstream 649982 6631086 ~ 6631499 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other downstream 797986 6480743 ~ 6483986 (-)
CI01000304_04661808_04672936 PPWD1 other downstream 2608534 4661766 ~ 4672947 (-)
CI01000304_04263955_04264962 NA other downstream 3016280 4263846 ~ 4265201 (-)
G422810 NA other upstream 344321 7630159 ~ 7652703 (-)
G423386 NA other upstream 1576385 8862223 ~ 8865296 (-)
CI01000304_09566730_09575706 NA other upstream 2282518 9566730 ~ 9575706 (-)
CI01000304_09737662_09738777 NA other upstream 2450908 9736746 ~ 9738777 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 2867608 10160458 ~ 10163762 (-)

Expression


Co-expression Network