CI01000304_08222591_08229908


Basic Information

Item Value
gene id CI01000304_08222591_08229908
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 8222591 ~ 8230947 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_08222591_08229908.mRNA
ATGTCTAAAACGGCCTTGTGTTAGACGAACAAGTTTGTCCCCATTGTCCTCATTTATGATATTGACTGCGCTCGCCGTGTTTCTCAAAGCAAATGTGACAGGAGCGATGAAAGTGACCTCCAGTGGACCACAGACTATGCAGATGGCTCAAGGGGAACCTGTTACACTAGACTGCACCTACACGTCAGGTCCAGCAGACATTGGCGAGCTTGACATTGAGTGGTCAGTTGTCAGTCCAGACACCACAAAAAAAGACCAGATGATCATATCATATACAGGTGGAAGGAGATATGCCCATGGTGACCCTGCTTTAATGAAAGGTGTGAACTTCACAGCTGTAGACCCATCCCAGGGAGATGCATCTCTATCTATCTCCTCGCTGATGGTCAGCCATGCTGGAACGTATCAGTGCAAAGTTAAAAAGGCACCTGGGGTGGACAGTCGGAAAATATTGCTGATTGTGATGGTGAGGCCGTCCGTGCCGAAGTGTTGGGTTGATGGTGGTGAAGCCGTGGACTCCCTCACAGGAGAACTTCTAATCCGTAACCATTCTGTAAGCCACTCCGGTGTCTATTCCTGTGAAGTTTCCAATGCTGTTGGGAAAGAGAGCTGTCGGCTTAACCTTCAAGCTGTGAAGCCTCCTAACAGAGCAGGGGTCATCACAGGCACCGTTGTTGGATGTTTACTGCTCATCATAATCGTCCTGCTCATTATATGGCTTCTCGTCTTCAGATGTAACTGGAATCGTCAGGAGAAAGAGTTCTCCAATGAGATTAGAGAGGATGCTCCTGCGCCTGAGAGCCGTCCTACCAGCCGAATCTCCAGCTTCCGTTCAGGTGTGGCCTACAGCCAGGTGGGCCATACCCAAACTGAGCATTCACCCTCCACTAACACCAGCTACAGCACCGCAAAGTATGACAGCAGATTTGGCTATGCTGTATGAGAAGTCATGCTTTTATTATACTGAAGATTGTCATTGTACACTATGTAACTATTTGCCCTCTAGTGGTTATAAAACAAAAATGCATGCATTTTGGGGAAGAACATTTAGGCTTTGCTTCGCTCTGCGAGACTGTGCGGGTGAATATGACCCTTCACAATATATAATGCATTACAATGAACTCTGTTAGAGAGCTAAAAATCTCGTCCCGGGGGGTAAAAATCACATTCCAGGGGGTTCTGTTTGCACCCAGAGTAGCCAGAACTTTTCTCTATTTACAGATATGATGAGACATGAAAGGGCAAGTGTCGTATGTACGGAATTTCCCGCGAAAACCGTCCCACTTGTTCTAAAATATAAACACTTATAATAGGCTTACCATAGGAAATAAGGGTAAGACAAAAACACATTTTGGAAGAAGGATTGATGATGTATTGACTCTTATTTCACTCTTAGAAAAAAAGGTTCTAGCTTCCGACGGTCATCCGCCGGAAGCTAGTTATTTGAATTTATACAATTTTATATATGGAGATTTTTCTTAGAAAAACGCATTGCTTCACTTCAAAAGGCCTTTATTAACCCACTGGAGCCATATGGATTACTTTGATTATGGATGGATGCATTTTTTTCACTACCCCATTCACTACCATTATAAAACTTGGAGGACTAAGGATATTTTTAAATATATCTCCGATTTTGTTCGTCTGAAAGAAGATGAAAGTCTGAAAGAAGTCATATACACCTAGGATGGCTTGAGGGTGAGTAAATCATGGGATAGTTTTCATTTTTGGGTGAACTATCCCTTTAAAATTGAATCATGAATCAGTGGATTCTCTCCCTATTTCTGTGTATTGATTTGATCATGTTGCAAGATACAATATGAAATCAAAATGTTATGTCTTGTAATTGTGTAATGATGCAAAACCAGATCTCATGTAAGATGATATTGACAGAGCTCTTAACAAGGCCTAAATTCAATATTTTTGTAAGGAGCATCCATTATTGATTTGTTTGTTTGTTTGTCTTTGTTAAGATTATGTAA

Function

NR:

description
Zgc:110326

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_08222591_08229908.mRNA True 1982 mRNA 0.42 7 8222591 8230947

Neighbor

gene id symbol gene type direction distance location
CI01000304_08120416_08124549 LRRTM4L1 coding upstream 97994 8120416 ~ 8124597 (+)
CI01000304_07989774_08014921 IGSF9A coding upstream 207287 7988902 ~ 8015304 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A coding upstream 241871 7979078 ~ 7980735 (+)
CI01000304_07927790_07957821 DPYSL2A, DPYSL2B, DPYSL2 coding upstream 264129 7927790 ~ 7958462 (+)
CI01000304_07909498_07914625 BNIP3LB coding upstream 306649 7909498 ~ 7915942 (+)
CI01000304_08232073_08235598 NA coding downstream 346 8231293 ~ 8235655 (+)
CI01000304_08547909_08562342 XPO7 coding downstream 316962 8547909 ~ 8562604 (+)
CI01000304_08582404_08594691 DMTN coding downstream 351457 8582404 ~ 8594884 (+)
CI01000304_08624038_08653167 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding downstream 393091 8624038 ~ 8653550 (+)
CI01000304_08671901_08672203 NA coding downstream 440857 8671770 ~ 8672555 (+)
G423011 NA non-coding upstream 2408 8219614 ~ 8220183 (+)
G423020 NA non-coding upstream 60900 8160555 ~ 8161691 (+)
G423046 NA non-coding upstream 69355 8152857 ~ 8153236 (+)
G423043 NA non-coding upstream 71421 8150802 ~ 8151170 (+)
G423041 NA non-coding upstream 74151 8148071 ~ 8148440 (+)
G423085 NA non-coding downstream 44673 8275620 ~ 8279848 (+)
G423093 NA non-coding downstream 61940 8292887 ~ 8293121 (+)
G423099 NA non-coding downstream 79925 8310872 ~ 8311078 (+)
G423101 NA non-coding downstream 81467 8312414 ~ 8312712 (+)
G423105 NA non-coding downstream 93790 8324737 ~ 8324963 (+)
G421435 NA other upstream 737903 7484141 ~ 7484688 (+)
CI01000304_07352697_07354032 NA other upstream 868259 7352621 ~ 7354396 (+)
G421162 NA other upstream 1979594 6241233 ~ 6242997 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other upstream 3045800 5173426 ~ 5176791 (+)
G423614 NA other downstream 718089 8949036 ~ 8949422 (+)
CI01000304_09564068_09565679 HRH2B other downstream 1333658 9561005 ~ 9565778 (+)
G424246 NA other downstream 1889452 10116343 ~ 10127322 (+)

Expression


Co-expression Network